L290F-A222T chlamydomonas Rubisco mutant


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1uw9a1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
Ad1uw9a2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
Bd1uw9b1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
Bd1uw9b2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
D [auth E]d1uw9e1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
D [auth E]d1uw9e2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
F [auth H]d1uw9h1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
F [auth H]d1uw9h2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
I [auth K]d1uw9k1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
I [auth K]d1uw9k2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
K [auth O]d1uw9o1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
K [auth O]d1uw9o2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
M [auth R]d1uw9r1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
M [auth R]d1uw9r2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
O [auth V]d1uw9v1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
O [auth V]d1uw9v2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain automated matches automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
Cd1uw9c_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
E [auth F]d1uw9f_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
G [auth I]d1uw9i_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
H [auth J]d1uw9j_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
J [auth M]d1uw9m_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
L [auth P]d1uw9p_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
N [auth T]d1uw9t_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)
P [auth W]d1uw9w_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit automated matches (Chlamydomonas reinhardtii ) [TaxId: 3055 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
F [auth H]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
F [auth H]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
I [auth K]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
I [auth K]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
K [auth O]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
K [auth O]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
M [auth R]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
M [auth R]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
O [auth V]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8035888 3000552 SCOP2B (2022-06-29)
O [auth V]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035891 3001258 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
G [auth I]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
H [auth J]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
N [auth T]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)
P [auth W]SCOP2B SuperfamilyRuBisCO, small subunit 8035897 3001622 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFer4,DUF3470e1uw9A1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
ANAD_binding_3e1uw9A2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
BFer4,DUF3470e1uw9B1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
BNAD_binding_3e1uw9B2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
D [auth E]Fer4,DUF3470e1uw9E1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
D [auth E]NAD_binding_3e1uw9E2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
F [auth H]Fer4,DUF3470e1uw9H1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
F [auth H]NAD_binding_3e1uw9H2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
I [auth K]Fer4,DUF3470e1uw9K1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
I [auth K]NAD_binding_3e1uw9K2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
K [auth O]Fer4,DUF3470e1uw9O1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
K [auth O]NAD_binding_3e1uw9O2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
M [auth R]Fer4,DUF3470e1uw9R1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
M [auth R]NAD_binding_3e1uw9R2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
O [auth V]Fer4,DUF3470e1uw9V1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Fer4,DUF3470ECOD (v295.2)
O [auth V]NAD_binding_3e1uw9V2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)
CPropep_M14e1uw9C1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
E [auth F]Propep_M14e1uw9F1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
G [auth I]Propep_M14e1uw9I1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
H [auth J]Propep_M14e1uw9J1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
J [auth M]Propep_M14e1uw9M1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
L [auth P]Propep_M14e1uw9P1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
N [auth T]Propep_M14e1uw9T1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)
P [auth W]Propep_M14e1uw9W1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Propep_M14ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
A3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
B3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
B3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
D [auth E]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
D [auth E]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
F [auth H]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
F [auth H]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
I [auth K]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
I [auth K]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
K [auth O]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
K [auth O]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
M [auth R]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
M [auth R]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
O [auth V]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
O [auth V]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
C3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
E [auth F]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
G [auth I]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
H [auth J]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
J [auth M]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
L [auth P]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
N [auth T]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
P [auth W]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02788Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)Ribulose bisphosphate carboxylase large chain, N-terminal domainThe N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. Domain
PF00016Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)Ribulose bisphosphate carboxylase large chain, catalytic domainThe C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. Domain
PF00101Ribulose bisphosphate carboxylase, small chain (RuBisCO_small)Ribulose bisphosphate carboxylase, small chainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020888Ribulose bisphosphate carboxylase large subunit, type IFamily
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilyHomologous Superfamily
IPR020878Ribulose bisphosphate carboxylase, large chain, active siteActive Site
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalDomain
IPR033966RuBisCOFamily
IPR036422RuBisCO large subunit, N-terminal domain superfamilyHomologous Superfamily
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalDomain
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilyHomologous Superfamily
IPR024681Ribulose bisphosphate carboxylase, small subunitFamily
IPR000894Ribulose bisphosphate carboxylase small subunit, domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
HYP Parent Component: PRO

AA0030

:  4-hydroxy-L-proline MOD:00039
KCX Parent Component: LYS

AA0030

SMC Parent Component: CYS

AA0030 , AA0234

:  4-hydroxy-L-proline MOD:00039 , S-methyl-L-cysteine MOD:00239