2RFI
Crystal structure of catalytic domain of human euchromatic histone methyltransferase 1 in complex with SAH and dimethylated H3K9 peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CXC domain-like | 8091567 | 3002037 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SET domain | 8004150 | 3000162 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SET domain | 8004150 | 3000162 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CXC domain-like | 8091567 | 3002037 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SET | e2rfiA3 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
A | Pre-SET | e2rfiA2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: Pre-SET | ECOD (1.6) |
B | SET | e2rfiB1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
B | Pre-SET | e2rfiB2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: Pre-SET | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
B | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF05033 | Pre-SET motif (Pre-SET) | Pre-SET motif | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043550 | Histone-lysine N-methyltransferase EHMT1/EHMT2 | Family | |
IPR007728 | Pre-SET domain | Domain | |
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR001214 | SET domain | Domain | |
IPR047762 | EHMT1/2, cysteine-rich region | Domain | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR038035 | Histone-lysine N-methyltransferase EHMT1, SET domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
C [auth P], D [auth Q] | MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 |