The structure of IL-13 in complex with IL-13Ralpha2
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Protein Modification Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d3lb6a_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | Interleukin-13 (IL-13) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| C [auth B] | d3lb6b_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | Interleukin-13 (IL-13) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Cu_amine_oxid | e3lb6A1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: sensor domains | T: sensor domains | F: Cu_amine_oxid | ECOD (v294.1) |
| D | Glyco_hydro_39 | e3lb6D3 | A: a/b three-layered sandwiches | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: Glyco_hydro_39 | ECOD (v294.1) |
| C [auth B] | RVP | e3lb6B1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.1) |
| B [auth C] | DNA_methylase | e3lb6C1 | A: a/b three-layered sandwiches | X: YrdC/RibB | H: SH3 | T: SH3 | F: DNA_methylase | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
| D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| C [auth B] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
| B [auth C] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| IL13RA2 | 3F-DOMAIN | Homo sapiens (human) | IL13RA2*01 | F-LIKE-DOMAIN F-DOMAIN | RPI | 3F-DOMAIN | IMGT (202612-0) | |
| B [auth C] | IL13RA2 | 3F-DOMAIN | Homo sapiens (human) | IL13RA2*01 | F-LIKE-DOMAIN F-DOMAIN | RPI | 3F-DOMAIN | IMGT (202612-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain | |
| B [auth C] | PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 | |
| C [auth B] | MLY | Parent Component: LYS :  AA0075 , AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 |
| B [auth C] | MLY | Parent Component: LYS :  AA0075 , AA0075 , AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 , N6,N6-dimethyl-L-lysine MOD:00084 |














