4EE7 | pdb_00004ee7

Crystal Structure of the Novel Phenazine Prenyltransferase EpzP in complex with S-thiolodiphosphate (methylated)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4ee7b_ Alpha and beta proteins (a+b) Antiparallel beta/alpha barrel (PT-barrel) Prenyltransferase-like automated matches automated matches (Streptomyces virginiae ) [TaxId: 1961 ], SCOPe (2.08)
Ad4ee7a_ Alpha and beta proteins (a+b) Antiparallel beta/alpha barrel (PT-barrel) Prenyltransferase-like automated matches automated matches (Streptomyces virginiae ) [TaxId: 1961 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyPrenyltransferase-like 8053372 3001496 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPrenyltransferase-like 8053372 3001496 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BABC_trane4ee7B1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (develop294)
AABC_trane4ee7A1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Prenyltransferase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036239Prenyltransferase-like superfamilyHomologous Superfamily
A, B
IPR033964Aromatic prenyltransferaseFamily
A, B
IPR020965Aromatic prenyltransferase, CloQ-typeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
MLY Parent Component: LYS

RESID:  AA0075

PSI-MOD :  N6,N6-dimethyl-L-lysine MOD:00084