Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| P | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
| H | SCOP2 Family | CPXV203-like | 8046020 | 4004828 | SCOP2 (2022-06-29) |
| H | SCOP2 Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2 (2022-06-29) |
| D | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| P | SmpA_OmlA | e4hkjP1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: SmpA_OmlA | ECOD (v294.1) |
| L | SmpA_OmlA | e4hkjL1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: SmpA_OmlA | ECOD (v294.1) |
| H | SmpA_OmlA | e4hkjH1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: SmpA_OmlA | ECOD (v294.1) |
| D | SH2 | e4hkjD1 | A: a/b three-layered sandwiches | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: SH2 | ECOD (v294.1) |
| N | RRM_1 | e4hkjN1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| J | RRM_1 | e4hkjJ1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| F | RRM_1 | e4hkjF1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| B | Homeodomain | e4hkjB1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: Homeodomain | ECOD (v294.1) |
| M | RRM_1 | e4hkjM1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| I | RRM_1 | e4hkjI1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| E | RRM_1 | e4hkjE1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| A | Homeodomain | e4hkjA1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: Homeodomain | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| MH1-K1b (H2-K1b) | B2M | Mus musculus (house mouse) | B2M*01, B2M*02 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202611-0) | |
| MH1-K1b (H2-K1b) | I-ALPHA | Mus musculus (house mouse) | MH1-K1b | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202611-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain |














