4J4L
Modular evolution and design of the protein binding interface
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | L domain-like | 8095999 | 3001010 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | L domain-like | 8095999 | 3001010 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | 4-helical cytokines | 8037068 | 3001717 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | 4-helical cytokines | 8037068 | 3001717 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LRR_8_1 | e4j4lA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
A | Internalin_N | e4j4lA2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: Internalin_N | ECOD (1.6) |
B | LRR_8_1 | e4j4lB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
B | Internalin_N | e4j4lB2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: Internalin_N | ECOD (1.6) |
C | IL6 | e4j4lC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
D | IL6 | e4j4lD1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
B | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
C | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
D | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13855 | Leucine rich repeat (LRR_8) | Leucine rich repeat | - | Repeat | |
PF12354 | Bacterial adhesion/invasion protein N terminal (Internalin_N) | Bacterial adhesion/invasion protein N terminal | This domain family is found in bacteria, and is approximately 60 amino acids in length. The family is found in association with Pfam:PF00560, Pfam:PF08191, Pfam:PF09479. There are two completely conserved residues (I and F) that may be functionally i ... | Domain | |
PF11921 | Domain of unknown function (DUF3439) (DUF3439) | Domain of unknown function (DUF3439) | - | Family | |
PF00489 | Interleukin-6/G-CSF/MGF family (IL6) | Interleukin-6/G-CSF/MGF family | - | Domain |