Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyL domain-like 8095999 3001010 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyL domain-like 8095999 3001010 SCOP2B (2022-06-29)
CSCOP2B Superfamily4-helical cytokines 8037068 3001717 SCOP2B (2022-06-29)
DSCOP2B Superfamily4-helical cytokines 8037068 3001717 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALRR_8_1e4j4lA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: LRR_8_1ECOD (1.6)
AInternalin_Ne4j4lA2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: Internalin_NECOD (1.6)
BLRR_8_1e4j4lB1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: LRR_8_1ECOD (1.6)
BInternalin_Ne4j4lB2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: Internalin_NECOD (1.6)
CIL6e4j4lC1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: IL6ECOD (1.6)
DIL6e4j4lD1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: IL6ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
A, B
PF12354Bacterial adhesion/invasion protein N terminal (Internalin_N)Bacterial adhesion/invasion protein N terminalThis domain family is found in bacteria, and is approximately 60 amino acids in length. The family is found in association with Pfam:PF00560, Pfam:PF08191, Pfam:PF09479. There are two completely conserved residues (I and F) that may be functionally i ...This domain family is found in bacteria, and is approximately 60 amino acids in length. The family is found in association with Pfam:PF00560, Pfam:PF08191, Pfam:PF09479. There are two completely conserved residues (I and F) that may be functionally important. Internalin mediates bacterial adhesion and invasion of epithelial cells in the human intestine through specific interaction with its host cell receptor E-cadherin. This family is the N terminal of internalin, the cap domain of the protein. The cap domain is conserved between different internalin types. The cap domain does not interact with E cadherin, therefore its function is presumably structural: capping the hydrophobic core.
Domain
A, B
PF11921Domain of unknown function (DUF3439) (DUF3439)Domain of unknown function (DUF3439)- Family
C, D
PF00489Interleukin-6/G-CSF/MGF family (IL6)Interleukin-6/G-CSF/MGF family- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Internalin B,REPEAT MODULES,Variable lymphocyte receptor B-
C, D
Interleukin-6

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C, D
PharosP05231