5HYN

Structure of Human Polycomb Repressive Complex 2 (PRC2) with oncogenic histone H3K27M peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	VEFS box-like	8090819	3002459	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	VEFS box-like	8090819	3002459	SCOP2B (2022-06-29)
R [auth S]	SCOP2B Superfamily	VEFS box-like	8090819	3002459	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	VEFS box-like	8090819	3002459	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SET	e5hynA7	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: SET	ECOD (1.6)
A	KOG1079_1st	e5hynA2	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: KOG1079_1st	ECOD (1.6)
A	Myb_DNA-binding_3	e5hynA3	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_3	ECOD (1.6)
A	KOG1079_4th	e5hynA6	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_4th	ECOD (1.6)
A	KOG1079_3rd	e5hynA5	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_3rd	ECOD (1.6)
A	KOG1079_2nd	e5hynA4	A: few secondary structure elements	X: Ezh2 MCSS domain (From Topology)	H: Ezh2 MCSS domain (From Topology)	T: Ezh2 MCSS domain	F: KOG1079_2nd	ECOD (1.6)
A	EZH2_WD-Binding	e5hynA1	A: extended segments	X: Ezh2 N-terminal domain (From Topology)	H: Ezh2 N-terminal domain (From Topology)	T: Ezh2 N-terminal domain	F: EZH2_WD-Binding	ECOD (1.6)
F	SET	e5hynF7	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: SET	ECOD (1.6)
F	KOG1079_1st	e5hynF1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: KOG1079_1st	ECOD (1.6)
F	Myb_DNA-binding_3	e5hynF2	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_3	ECOD (1.6)
F	KOG1079_4th	e5hynF4	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_4th	ECOD (1.6)
F	KOG1079_3rd	e5hynF3	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_3rd	ECOD (1.6)
F	KOG1079_2nd	e5hynF6	A: few secondary structure elements	X: Ezh2 MCSS domain (From Topology)	H: Ezh2 MCSS domain (From Topology)	T: Ezh2 MCSS domain	F: KOG1079_2nd	ECOD (1.6)
F	EZH2_WD-Binding	e5hynF5	A: extended segments	X: Ezh2 N-terminal domain (From Topology)	H: Ezh2 N-terminal domain (From Topology)	T: Ezh2 N-terminal domain	F: EZH2_WD-Binding	ECOD (1.6)
K	SET	e5hynK2	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: SET	ECOD (1.6)
K	KOG1079_1st	e5hynK3	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: KOG1079_1st	ECOD (1.6)
K	Myb_DNA-binding_3	e5hynK5	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_3	ECOD (1.6)
K	KOG1079_4th	e5hynK7	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_4th	ECOD (1.6)
K	KOG1079_3rd	e5hynK6	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_3rd	ECOD (1.6)
K	KOG1079_2nd	e5hynK1	A: few secondary structure elements	X: Ezh2 MCSS domain (From Topology)	H: Ezh2 MCSS domain (From Topology)	T: Ezh2 MCSS domain	F: KOG1079_2nd	ECOD (1.6)
K	EZH2_WD-Binding	e5hynK4	A: extended segments	X: Ezh2 N-terminal domain (From Topology)	H: Ezh2 N-terminal domain (From Topology)	T: Ezh2 N-terminal domain	F: EZH2_WD-Binding	ECOD (1.6)
P [auth Q]	SET	e5hynQ7	A: beta barrels	X: beta-clip	H: SET domain-like (From Topology)	T: SET domain-like	F: SET	ECOD (1.6)
P [auth Q]	KOG1079_1st	e5hynQ4	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: KOG1079_1st	ECOD (1.6)
P [auth Q]	Myb_DNA-binding_3	e5hynQ8	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_3	ECOD (1.6)
P [auth Q]	KOG1079_4th	e5hynQ5	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_4th	ECOD (1.6)
P [auth Q]	KOG1079_3rd	e5hynQ2	A: few secondary structure elements	X: Zn3Cys9 preSET domain-related (From Topology)	H: Zn3Cys9 preSET domain-related (From Topology)	T: Zn3Cys9 preSET domain-related	F: KOG1079_3rd	ECOD (1.6)
P [auth Q]	KOG1079_2nd	e5hynQ6	A: few secondary structure elements	X: Ezh2 MCSS domain (From Topology)	H: Ezh2 MCSS domain (From Topology)	T: Ezh2 MCSS domain	F: KOG1079_2nd	ECOD (1.6)
P [auth Q]	EZH2_WD-Binding	e5hynQ3	A: extended segments	X: Ezh2 N-terminal domain (From Topology)	H: Ezh2 N-terminal domain (From Topology)	T: Ezh2 N-terminal domain	F: EZH2_WD-Binding	ECOD (1.6)
B	ANAPC4_WD40_5	e5hynB1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_5	ECOD (1.6)
G	ANAPC4_WD40_5	e5hynG1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_5	ECOD (1.6)
L	ANAPC4_WD40_5	e5hynL1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_5	ECOD (1.6)
Q [auth R]	ANAPC4_WD40_5	e5hynR1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_5	ECOD (1.6)
H	VEFS-Box	e5hynH1	A: alpha arrays	X: lambda integrase-N-like	H: VEFS domain (From Topology)	T: VEFS domain	F: VEFS-Box	ECOD (1.6)
M	VEFS-Box	e5hynM1	A: alpha arrays	X: lambda integrase-N-like	H: VEFS domain (From Topology)	T: VEFS domain	F: VEFS-Box	ECOD (1.6)
R [auth S]	VEFS-Box	e5hynS1	A: alpha arrays	X: lambda integrase-N-like	H: VEFS domain (From Topology)	T: VEFS domain	F: VEFS-Box	ECOD (1.6)
C	VEFS-Box	e5hynC1	A: alpha arrays	X: lambda integrase-N-like	H: VEFS domain (From Topology)	T: VEFS domain	F: VEFS-Box	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
G	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
L	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
Q [auth R]	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, F, K, P [auth Q]	PF18264	CXC domain (preSET_CXC)	CXC domain	This domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain.	Domain
A, F, K, P [auth Q]	PF00856	SET domain (SET)	SET domain	-	Family
A, F, K, P [auth Q]	PF18118	Polycomb repressive complex 2 tri-helical domain (PRC2_HTH_1)	Polycomb repressive complex 2 tri-helical domain	This domain can be found in the Polycomb repressive complex 2 (PRC2) present in Homo sapiens. Polycomb complexes maintain repressive chromatin states by silencing gene expression. PRC2 does this by methylating lysine 27 of histone H3. This domain mak ...	This domain can be found in the Polycomb repressive complex 2 (PRC2) present in Homo sapiens. Polycomb complexes maintain repressive chromatin states by silencing gene expression. PRC2 does this by methylating lysine 27 of histone H3. This domain makes up part of the N-lobe which is involved in regulation [1].	Domain
A, F, K, P [auth Q]	PF11616	WD repeat binding protein EZH2 (EZH2_WD-Binding)	WD repeat binding protein EZH2	-	Family
A, F, K, P [auth Q]	PF21358	Ezh2, MCSS domain (Ezh2_MCSS)	Ezh2, MCSS domain	This entry represents the MCSS domain found in the middle region of the Histone-lysine N-methyltransferase EZH2 [1-5]. It makes contacts with the adjacent SANT domain and the Vefs domain from EED. Additionally, this domain contains a zinc-binding mot ...	This entry represents the MCSS domain found in the middle region of the Histone-lysine N-methyltransferase EZH2 [1-5]. It makes contacts with the adjacent SANT domain and the Vefs domain from EED. Additionally, this domain contains a zinc-binding motif and contributes two cysteine residues for a second one, formed with two cysteines from the SANT domain [2].	Domain
B, G, L, Q [auth R]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, F, K, P [auth Q]	Histone-lysine N-methyltransferase EZH2	protein-lysine N-methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups lysine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity RNA binding binding organic cyclic compound binding lncRNA binding protein-lysine N-methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups lysine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity RNA binding binding organic cyclic compound binding lncRNA binding nucleic acid binding histone H3K27 trimethyltransferase activity histone H3 methyltransferase activity histone H3K27 methyltransferase activity histone methyltransferase activity histone modifying activity primary miRNA binding chromatin binding promoter-specific chromatin binding DNA binding sequence-specific DNA binding double-stranded DNA binding core promoter sequence-specific DNA binding RNA polymerase II core promoter sequence-specific DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding transcription factor binding transcription coregulator binding transcription corepressor binding protein binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding ribonucleoprotein complex binding protein-containing complex binding transcription corepressor activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity chromatin DNA binding	developmental process multicellular organismal process head development animal organ development brain development nervous system development cerebellar cortex development multicellular organism development cerebellum development central nervous system development metencephalon development anatomical structure development hindbrain development system development developmental process multicellular organismal process head development animal organ development brain development nervous system development cerebellar cortex development multicellular organism development cerebellum development central nervous system development metencephalon development anatomical structure development hindbrain development system development macromolecule modification metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process protein modification process negative regulation of stem cell differentiation regulation of biological process regulation of cellular process cellular developmental process regulation of developmental process negative regulation of developmental process biological regulation negative regulation of biological process regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation negative regulation of cellular process negative regulation of cell differentiation cell cycle G1 to G0 transition cell cycle process methylation transcription elongation by RNA polymerase II RNA metabolic process negative regulation of transcription elongation by RNA polymerase II regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of DNA-templated transcription elongation negative regulation of DNA-templated transcription regulation of transcription elongation by RNA polymerase II negative regulation of metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process negative regulation of DNA-templated transcription, elongation regulation of gene expression DNA-templated transcription elongation biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process subtelomeric heterochromatin formation telomere organization cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis heterochromatin formation epigenetic regulation of gene expression chromosome organization organelle organization negative regulation of gene expression constitutive heterochromatin formation negative regulation of gene expression, epigenetic mitotic cell cycle process cell cycle phase transition G1/S transition of mitotic cell cycle cell cycle G1/S phase transition mitotic cell cycle mitotic cell cycle phase transition cellular response to stimulus intracellular receptor signaling pathway response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of retinoic acid receptor signaling pathway regulation of signal transduction hormone-mediated signaling pathway intracellular signal transduction negative regulation of cell communication cell communication cellular response to endogenous stimulus response to hormone regulation of intracellular signal transduction signal transduction cellular response to hormone stimulus regulation of signaling negative regulation of response to stimulus response to endogenous stimulus negative regulation of retinoic acid receptor signaling pathway retinoic acid receptor signaling pathway negative regulation of signal transduction cellular response to chemical stimulus regulation of response to stimulus response to chemical regulation of cell communication nuclear receptor-mediated signaling pathway regulation of protein modification process positive regulation of phosphorylation regulation of catalytic activity regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process regulation of transferase activity positive regulation of phosphate metabolic process positive regulation of protein serine/threonine kinase activity positive regulation of metabolic process positive regulation of molecular function positive regulation of protein modification process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process positive regulation of protein kinase activity phosphorus metabolic process positive regulation of protein phosphorylation positive regulation of cellular process protein phosphorylation positive regulation of transferase activity positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of catalytic activity regulation of protein kinase activity regulation of molecular function positive regulation of kinase activity regulation of kinase activity regulation of protein serine/threonine kinase activity regulation of phosphorylation regulation of phosphorus metabolic process negative regulation of striated muscle cell differentiation negative regulation of muscle cell differentiation regulation of striated muscle cell differentiation muscle cell differentiation muscle structure development regulation of muscle cell differentiation striated muscle cell differentiation regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II tissue regeneration skeletal muscle tissue regeneration developmental growth skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration growth maintenance of cell number regeneration epithelium development epidermal cell differentiation epidermis development tissue development epithelial cell differentiation skin development keratinocyte differentiation forebrain development pallium development telencephalon development hippocampus development limbic system development hemopoiesis B cell activation cell activation cell development mononuclear cell differentiation lymphocyte differentiation lymphocyte activation leukocyte activation B cell differentiation immune system process leukocyte differentiation rhythmic process circadian rhythm regulation of circadian rhythm regulation of epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition mesenchyme development positive regulation of developmental process positive regulation of cell differentiation regulation of multicellular organismal process epithelial to mesenchymal transition positive regulation of multicellular organismal process mesenchymal cell differentiation positive regulation of hydrolase activity regulation of hydrolase activity regulation of GTPase activity positive regulation of GTPase activity protein localization localization protein localization to chromatin cellular localization protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization regulation of neurogenesis regulation of gliogenesis regulation of cell development regulation of nervous system development neurogenesis gliogenesis regulation of multicellular organismal development gland development animal organ regeneration liver development hepaticobiliary system development liver regeneration cellular response to nitrogen compound cellular response to trichostatin A cellular response to organic cyclic compound response to oxygen-containing compound response to nitrogen compound response to trichostatin A response to antibiotic cellular response to oxygen-containing compound cellular response to antibiotic response to organic cyclic compound cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation cellular response to oxidative stress cellular response to chemical stress cellular response to hydrogen peroxide response to reactive oxygen species response to hydrogen peroxide response to oxidative stress cellular response to reactive oxygen species cellular response to stress response to stress multicellular organismal-level homeostasis homeostatic process homeostasis of number of cells hepatocyte homeostasis regulation of epidermal cell differentiation negative regulation of keratinocyte differentiation regulation of epithelial cell differentiation negative regulation of epidermis development negative regulation of epithelial cell differentiation negative regulation of epidermal cell differentiation regulation of epidermis development negative regulation of multicellular organismal process regulation of keratinocyte differentiation positive regulation of cell communication positive regulation of signal transduction regulation of MAP kinase activity intracellular signaling cassette positive regulation of MAP kinase activity positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade positive regulation of response to stimulus MAPK cascade positive regulation of signaling facultative heterochromatin formation regulation of cell cycle phase transition negative regulation of cell cycle regulation of cell cycle G1/S phase transition negative regulation of mitotic cell cycle regulation of mitotic cell cycle negative regulation of cell cycle phase transition regulation of cell cycle negative regulation of G1/S transition of mitotic cell cycle negative regulation of mitotic cell cycle phase transition regulation of cell cycle process negative regulation of cell cycle G1/S phase transition negative regulation of cell cycle process regulation of mitotic cell cycle phase transition regulation of G1/S transition of mitotic cell cycle positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cell projection organization neuron projection development neuron differentiation dendrite development positive regulation of neuron projection development positive regulation of cell projection organization plasma membrane bounded cell projection organization regulation of cell projection organization positive regulation of dendrite development generation of neurons regulation of dendrite development neuron development regulation of plasma membrane bounded cell projection organization positive regulation of cell cycle positive regulation of cell cycle G1/S phase transition positive regulation of cell cycle phase transition positive regulation of cell cycle process trans-synaptic signaling synaptic transmission, GABAergic cell-cell signaling chemical synaptic transmission synaptic signaling anterograde trans-synaptic signaling regulation of kidney development renal system development kidney development regulatory ncRNA-mediated gene silencing regulatory ncRNA-mediated heterochromatin formation response to lipid response to estradiol response to tetrachloromethane muscle hypertrophy system process striated muscle adaptation striated muscle hypertrophy muscle system process muscle adaptation cardiac muscle adaptation cardiac muscle hypertrophy cardiac muscle hypertrophy in response to stress muscle hypertrophy in response to stress regulation of cytokine production involved in inflammatory response cytokine production regulation of cytokine production negative regulation of cytokine production involved in inflammatory response production of molecular mediator involved in inflammatory response defense response negative regulation of cytokine production cytokine production involved in inflammatory response inflammatory response	membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle methyltransferase complex ESC/E(Z) complex nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome chromosome, telomeric region chromosomal region pericentric heterochromatin heterochromatin chromosome, centromeric region chromatin silencing complex pronucleus synapse cell junction
B, G, L, Q [auth R]	Polycomb protein EED	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding catalytic activity, acting on a protein transferase activity, transferring one-carbon groups protein methyltransferase activity histone modifying activity transferase activity methyltransferase activity catalytic activity histone methyltransferase activity enzyme regulator activity transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding catalytic activity, acting on a protein transferase activity, transferring one-carbon groups protein methyltransferase activity histone modifying activity transferase activity methyltransferase activity catalytic activity histone methyltransferase activity enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity chromatin binding identical protein binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process multicellular organism development multicellular organismal process spinal cord development central nervous system development anatomical structure development nervous system development system development cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis heterochromatin formation epigenetic regulation of gene expression negative regulation of gene expression negative regulation of gene expression, epigenetic transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm cytosol membrane-bounded organelle protein-containing complex histone methyltransferase complex catalytic complex nucleus intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm cytosol membrane-bounded organelle protein-containing complex histone methyltransferase complex catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex nucleoplasm organelle lumen methyltransferase complex ESC/E(Z) complex nuclear lumen
C, H, M, R [auth S]	Polycomb protein SUZ12	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding RNA binding organic cyclic compound binding lncRNA binding nucleic acid binding DNA binding sequence-specific DNA binding double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding RNA binding organic cyclic compound binding lncRNA binding nucleic acid binding DNA binding sequence-specific DNA binding double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding promoter-specific chromatin binding catalytic activity, acting on a protein transferase activity, transferring one-carbon groups protein methyltransferase activity histone modifying activity transferase activity methyltransferase activity catalytic activity histone methyltransferase activity enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity chromatin DNA binding methylated histone binding modification-dependent protein binding histone binding methylation-dependent protein binding cation binding ion binding metal ion binding small molecule binding	developmental process multicellular organismal process cellular developmental process nervous system development multicellular organism development neurogenesis central nervous system development gliogenesis oligodendrocyte differentiation glial cell differentiation cell differentiation anatomical structure development cellular process system development developmental process multicellular organismal process cellular developmental process nervous system development multicellular organism development neurogenesis central nervous system development gliogenesis oligodendrocyte differentiation glial cell differentiation cell differentiation anatomical structure development cellular process system development cell population proliferation regulation of biological process regulation of cellular process positive regulation of cell population proliferation regulation of cell population proliferation biological regulation positive regulation of biological process positive regulation of cellular process negative regulation of biological process cellular component organization chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process facultative heterochromatin formation negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of developmental process negative regulation of developmental process regulation of cell differentiation negative regulation of cell differentiation RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of DNA-templated transcription negative regulation of RNA metabolic process random inactivation of X chromosome sex-chromosome dosage compensation dosage compensation by inactivation of X chromosome	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen RSC-type complex ATPase complex protein-containing complex catalytic complex nuclear protein-containing complex chromatin chromosome SWI/SNF superfamily-type complex sex chromosome heterochromatin sex chromatin histone methyltransferase complex transferase complex PcG protein complex nucleoplasm methyltransferase complex ESC/E(Z) complex chromatin silencing complex ribonucleoprotein complex nuclear body
D, I, N [auth O], S [auth T]	H3K27M	DNA binding binding organic cyclic compound binding nucleic acid binding cell adhesion molecule binding cadherin binding protein binding protein heterodimerization activity protein dimerization activity structural molecule activity structural constituent of chromatin	protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization biosynthetic process protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization biosynthetic process metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process organelle organization telomere organization chromosome organization regulation of biosynthetic process regulation of biological process regulation of cellular process epigenetic regulation of gene expression biological regulation regulation of macromolecule metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of metabolic process	cellular anatomical structure membrane extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure protein-DNA complex cellular anatomical structure membrane extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle membraneless organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
E, J, O [auth P], T [auth U]	JARID2 K116me3	ubiquitin-modified protein reader activity ubiquitin-modified histone reader activity protein binding binding histone reader activity modification-dependent protein binding chromatin-protein adaptor activity protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity chromatin binding ubiquitin binding ubiquitin-like protein binding DNA binding ubiquitin-modified protein reader activity ubiquitin-modified histone reader activity protein binding binding histone reader activity modification-dependent protein binding chromatin-protein adaptor activity protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity chromatin binding ubiquitin binding ubiquitin-like protein binding DNA binding organic cyclic compound binding nucleic acid binding protein-lysine N-methyltransferase activity histone H3 methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups transferase activity S-adenosylmethionine-dependent methyltransferase activity histone H3K27 methyltransferase activity histone methyltransferase activity lysine N-methyltransferase activity protein methyltransferase activity histone modifying activity N-methyltransferase activity methyltransferase activity catalytic activity	developmental process multicellular organism development multicellular organismal process hepaticobiliary system development gland development animal organ development anatomical structure development liver development system development immune system development hematopoietic or lymphoid organ development thymus development immune system process central nervous system development developmental process multicellular organism development multicellular organismal process hepaticobiliary system development gland development animal organ development anatomical structure development liver development system development immune system development hematopoietic or lymphoid organ development thymus development immune system process central nervous system development nervous system development heart development heart growth cell population proliferation developmental growth cardiac muscle tissue development cardiac muscle cell proliferation growth organ growth tissue development striated muscle tissue development circulatory system development muscle cell proliferation cellular process cardiac muscle tissue growth muscle tissue development striated muscle cell proliferation protein localization protein localization to chromatin cellular localization protein localization to chromosome, centromeric region localization protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to pericentric heterochromatin protein localization to heterochromatin regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of growth regulation of cardiac muscle tissue growth regulation of developmental process negative regulation of biological process negative regulation of cardiac muscle tissue growth negative regulation of organ growth negative regulation of growth regulation of organ growth regulation of heart growth negative regulation of cellular process regulation of cardiac muscle cell proliferation regulation of multicellular organismal process negative regulation of cell population proliferation regulation of multicellular organismal development regulation of developmental growth negative regulation of heart growth negative regulation of developmental process negative regulation of developmental growth regulation of cell population proliferation negative regulation of multicellular organismal process negative regulation of cardiac muscle cell proliferation spleen development cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process facultative heterochromatin formation negative regulation of gene expression, epigenetic muscle hypertrophy regulation of muscle adaptation system process negative regulation of muscle hypertrophy response to stimulus regulation of system process striated muscle hypertrophy regulation of muscle system process muscle system process regulation of muscle hypertrophy regulation of cardiac muscle hypertrophy muscle adaptation regulation of response to stimulus cardiac muscle hypertrophy negative regulation of cardiac muscle hypertrophy RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of DNA-templated transcription negative regulation of RNA metabolic process stem cell differentiation cellular developmental process cell differentiation random inactivation of X chromosome sex-chromosome dosage compensation dosage compensation by inactivation of X chromosome response to peptide response to chemical response to cytokine response to leukemia inhibitory factor cellular response to cytokine stimulus cellular response to leukemia inhibitory factor	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex histone methyltransferase complex catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex histone methyltransferase complex catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex transferase complex intracellular organelle lumen nucleoplasm organelle lumen methyltransferase complex nuclear lumen PcG protein complex ESC/E(Z) complex membraneless organelle intracellular membraneless organelle chromatin chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, F, K, P [auth Q]	IPR048358	EZH1/2, MCSS domain	Domain
A, F, K, P [auth Q]	IPR041343	Polycomb repressive complex 2 subunit EZH1/EZH2, tri-helical domain	Domain
A, F, K, P [auth Q]	IPR046341	SET domain superfamily	Homologous Superfamily
A, F, K, P [auth Q]	IPR001214	SET domain	Domain
A, F, K, P [auth Q]	IPR045318	Histone-lysine N-methyltransferase EZH1/2-like	Family
A, F, K, P [auth Q]	IPR033467	Tesmin/TSO1-like CXC domain	Domain
A, F, K, P [auth Q]	IPR044439	EZH2, SET domain	Domain
A, F, K, P [auth Q]	IPR026489	CXC domain	Domain
A, F, K, P [auth Q]	IPR041355	Pre-SET CXC domain	Domain
A, F, K, P [auth Q]	IPR001005	SANT/Myb domain	Domain
A, F, K, P [auth Q]	IPR021654	Histone-lysine N-methyltransferase EZH1/EZH2	Family
B, G, L, Q [auth R]	IPR019775	WD40 repeat, conserved site	Conserved Site
B, G, L, Q [auth R]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
B, G, L, Q [auth R]	IPR001680	WD40 repeat	Repeat
B, G, L, Q [auth R]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B, G, L, Q [auth R]	IPR051243	Polycomb group WD repeat-containing protein	Family
C, H, M, R [auth S]	IPR019135	Polycomb protein, VEFS-Box	Domain
D, I, N [auth O], S [auth T]	IPR009072	Histone-fold	Homologous Superfamily
D, I, N [auth O], S [auth T]	IPR007125	Histone H2A/H2B/H3	Domain
D, I, N [auth O], S [auth T]	IPR000164	Histone H3/CENP-A	Family
E, J, O [auth P], T [auth U]	IPR003347	JmjC domain	Domain
E, J, O [auth P], T [auth U]	IPR003349	JmjN domain	Domain
E, J, O [auth P], T [auth U]	IPR001606	ARID DNA-binding domain	Domain
E, J, O [auth P], T [auth U]	IPR004198	Zinc finger, C5HC2-type	Domain
E, J, O [auth P], T [auth U]	IPR036431	ARID DNA-binding domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, F, K, P [auth Q]	Pharos: Q15910	Weaver syndrome follicular lymphoma osteosarcoma diffuse large B-cell lymphoma prostate cancer breast carcinoma myelodysplastic syndrome juvenile myelomonocytic leukemia primary myelofibrosis craniosynostosis Upper Extremity Deformities, Congenital endometrial carcinoma breast cancer malignant mesothelioma myelodysplastic/myeloproliferative Neoplasm Weaver syndrome follicular lymphoma osteosarcoma diffuse large B-cell lymphoma prostate cancer breast carcinoma myelodysplastic syndrome juvenile myelomonocytic leukemia primary myelofibrosis craniosynostosis Upper Extremity Deformities, Congenital endometrial carcinoma breast cancer malignant mesothelioma myelodysplastic/myeloproliferative Neoplasm non-small cell lung carcinoma inflammatory bowel disease ovarian cancer aleukemic leukemia invasive ductal breast carcinoma pilocytic astrocytoma lung disease psoriasis Sjogren syndrome chronic myelomonocytic leukemia malignant ependymoma cystic fibrosis ductal breast carcinoma in situ glioblastoma myelofibrosis hepatocellular carcinoma oligodendroglioma adrenal cortex carcinoma intellectual disability pancreatic intraductal papillary-mucinous carcinoma astrocytic tumor lung adenocarcinoma prostate disease breast disease lymphatic system disease congenital anemia malignant glioma trigonocephaly malignant pancreatic neoplasm endometrial cancer medulloblastoma epithelioid sarcoma hematologic disease nasopharyngeal carcinoma IgA glomerulonephritis interstitial cystitis pancreatic intraductal papillary-mucinous neoplasm atypical teratoid rhabdoid tumor large cell medulloblastoma primitive neuroectodermal tumor lung cancer cancer lymphoma sinusitis
B, G, L, Q [auth R]	Pharos: O75530	schwannoma Cohen-Gibson syndrome malignant peripheral nerve sheath tumor perineurioma attention deficit hyperactivity disorder, inattentive type intellectual disability Nerve Sheath Tumors peripheral nervous system neoplasm Weaver syndrome epithelioid sarcoma cataract follicular lymphoma nerve sheath neoplasm
C, H, M, R [auth S]	Pharos: Q15022	malignant glioma schwannoma endometrioid stromal sarcoma melanoma neurofibroma cancer glioblastoma mixed glioma adenoma perineurioma endometrial carcinoma giant cell glioblastoma malignant peripheral nerve sheath tumor microcystic adenoma papillary adenoma malignant glioma schwannoma endometrioid stromal sarcoma melanoma neurofibroma cancer glioblastoma mixed glioma adenoma perineurioma endometrial carcinoma giant cell glioblastoma malignant peripheral nerve sheath tumor microcystic adenoma papillary adenoma follicular thyroid adenoma glioma melanocytic nevus Nerve Sheath Tumors breast cancer ovarian cancer cystic fibrosis Pick disease lung cancer myopathy astrocytic tumor oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma dermatomyositis plasma cell myeloma endometrium neoplasm malignant ependymoma medulloblastoma nerve sheath neoplasm neurofibromatosis osteosarcoma cutaneous melanoma peripheral nervous system neoplasm endometrial cancer progressive supranuclear palsy Weaver syndrome
D, I, N [auth O], S [auth T]	Pharos: P68431	lung carcinoma glioblastoma glioma large cell medulloblastoma malignant mesothelioma non-small cell lung carcinoma allergic rhinitis ovarian cancer autism spectrum disorder psoriasis cutaneous lupus erythematosus tuberculosis ependymoma gastric carcinoma Glioma of Brain, Familial lung carcinoma glioblastoma glioma large cell medulloblastoma malignant mesothelioma non-small cell lung carcinoma allergic rhinitis ovarian cancer autism spectrum disorder psoriasis cutaneous lupus erythematosus tuberculosis ependymoma gastric carcinoma Glioma of Brain, Familial hypertensive disorder lung adenocarcinoma malignant colon neoplasm malignant pancreatic neoplasm osteoarthritis astrocytoma (excluding glioblastoma) pancreatic intraductal papillary-mucinous carcinoma breast cancer spina bifida cystic fibrosis exocrine pancreatic carcinoma glioma susceptibility 1 invasive ductal breast carcinoma lung cancer malignant glioma medulloblastoma osteosarcoma atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous neoplasm breast carcinoma subependymoma ductal breast carcinoma in situ gastric cancer hepatocellular carcinoma
E, J, O [auth P], T [auth U]	Pharos: Q92833	autism spectrum disorder osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia schizophrenia tuberculosis Autism Spectrum Disorders ovarian cancer plasma cell myeloma squamous cell carcinoma lung cancer pancreatic intraductal papillary-mucinous carcinoma psoriasis subependymal giant cell astrocytoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
E, J, O [auth P], T [auth U]	M3L	Parent Component: LYS RESID: AA0074 PSI-MOD : N6,N6,N6-trimethyl-L-lysine MOD:00083