5Y4R
Structure of a methyltransferase complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | d5y4rd_ | All beta proteins | Split barrel-like | PilZ domain-like | PilZ domain | Hypothetical protein PA4608 | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
D [auth C] | d5y4rc_ | All beta proteins | Split barrel-like | PilZ domain-like | PilZ domain | Hypothetical protein PA4608 | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth D] | SCOP2B Superfamily | PilZ domain-like | 8034997 | 3000480 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | PilZ domain-like | 8034997 | 3000480 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CheR_N | e5y4rA2 | A: alpha arrays | X: Chemotaxis receptor methyltransferase CheR, N-terminal domain (From Topology) | H: Chemotaxis receptor methyltransferase CheR, N-terminal domain (From Topology) | T: Chemotaxis receptor methyltransferase CheR, N-terminal domain | F: CheR_N | ECOD (1.6) |
A | CheR | e5y4rA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: CheR | ECOD (1.6) |
C [auth B] | CheR_N | e5y4rB2 | A: alpha arrays | X: Chemotaxis receptor methyltransferase CheR, N-terminal domain (From Topology) | H: Chemotaxis receptor methyltransferase CheR, N-terminal domain (From Topology) | T: Chemotaxis receptor methyltransferase CheR, N-terminal domain | F: CheR_N | ECOD (1.6) |
C [auth B] | CheR | e5y4rB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: CheR | ECOD (1.6) |
B [auth D] | PilZ | e5y4rD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
D [auth C] | PilZ | e5y4rC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth D] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
D [auth C] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF03705 | CheR methyltransferase, all-alpha domain (CheR_N) | CheR methyltransferase, all-alpha domain | CheR proteins are part of the chemotaxis signaling mechanism in bacteria. CheR methylates the chemotaxis receptor at specific glutamate residues. CheR is an S-adenosylmethionine- dependent methyltransferase. | Domain |
A, C [auth B] | PF01739 | CheR methyltransferase, SAM binding domain (CheR) | CheR methyltransferase, SAM binding domain | CheR proteins are part of the chemotaxis signaling mechanism in bacteria. CheR methylates the chemotaxis receptor at specific glutamate residues. CheR is an S-adenosylmethionine- dependent methyltransferase - the C-terminal domain (this one) binds SA ... | Domain |
B [auth D], D [auth C] | PF07238 | PilZ domain (PilZ) | PilZ domain | PilZ is a c-di-GMP binding domain [3] found in widespread cytoplasmic receptors, which is involved in regulation of motility, biofilm formation and virulence of many bacterial pathogens. This domain binds c-di-GMP through RXXXR and [D/N]hSXXG motifs, ... | Domain |