6K72 | pdb_00006k72

eIF2(aP) - eIF2B complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KSCOP2B SuperfamilyeIF2alpha middle domain-like 8042150 3001761 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyNucleic acid-binding proteins 8042151 3000135 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyeIF2alpha middle domain-like 8042150 3001761 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyNucleic acid-binding proteins 8042151 3000135 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNagB/RpiA/CoA transferase-like 8101599 3000693 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNagB/RpiA/CoA transferase-like 8101599 3000693 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
N [auth P]e6k72P1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ke6k72K1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Le6k72L1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ie6k72I1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Je6k72J1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ge6k72G1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
He6k72H1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ee6k72E1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Fe6k72F1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ce6k72C1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
De6k72D1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Ae6k72A1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
Be6k72B1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
N [auth P]PF09173Initiation factor eIF2 gamma, C terminal (eIF2_C)Initiation factor eIF2 gamma, C terminalMembers of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1]. Domain
N [auth P]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
K, L
PF07541Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha)Eukaryotic translation initiation factor 2 alpha subunit- Family
K, L
PF00575S1 RNA binding domain (S1)S1 RNA binding domainThe S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. Domain
G, H
PF01008Initiation factor 2 subunit family (IF-2B)Initiation factor 2 subunit family- Family
E, F
PF00483Nucleotidyl transferase (NTP_transferase)Nucleotidyl transferase- Family
C, D
PF01008Initiation factor 2 subunit family (IF-2B)Initiation factor 2 subunit family- Family
A, B
PF01008Initiation factor 2 subunit family (IF-2B)Initiation factor 2 subunit family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
N [auth P]Eukaryotic translation initiation factor 2 subunit 3
Eukaryotic translation initiation factor 2 subunit 2
K, L
Eukaryotic translation initiation factor 2 subunit 1
I, J
Translation initiation factor eIF-2B subunit epsilon
G, H
Translation initiation factor eIF-2B subunit delta
E, F
Translation initiation factor eIF-2B subunit gamma
C, D
Translation initiation factor eIF-2B subunit beta
A, B
Translation initiation factor eIF-2B subunit alpha

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
N [auth P]IPR000795Translational (tr)-type GTP-binding domainDomain
N [auth P]IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
N [auth P]IPR004161Translation elongation factor EFTu-like, domain 2Domain
N [auth P]IPR050543Eukaryotic Initiation Factor 2 Gamma SubunitFamily
N [auth P]IPR044128Initiation factor eIF2 gamma, GTP-binding domainDomain
N [auth P]IPR015256Initiation factor eIF2 gamma, C-terminalDomain
N [auth P]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
N [auth P]IPR044127Initiation factor eIF2 gamma, domain 2Domain
N [auth P]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR016190Translation initiation factor IF2/IF5, zinc-bindingHomologous Superfamily
IPR016189Translation initiation factor IF2/IF5, N-terminalHomologous Superfamily
IPR002735Translation initiation factor IF2/IF5 domainDomain
IPR045196Translation initiation factor IF2/IF5Family
K, L
IPR044126IF2a, S1-like domainDomain
K, L
IPR024054Translation initiation factor 2, alpha subunit, middle domain superfamilyHomologous Superfamily
K, L
IPR024055Translation initiation factor 2, alpha subunit, C-terminalHomologous Superfamily
K, L
IPR003029S1 domainDomain
K, L
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K, L
IPR011488Translation initiation factor 2, alpha subunitFamily
I, J
IPR044123Translation initiation factor eIF-2B subunit epsilon, W2 domainDomain
I, J
IPR016024Armadillo-type foldHomologous Superfamily
I, J
IPR056764EIF2B subunit epsilon/gamma, LbH domainDomain
I, J
IPR003307W2 domainDomain
I, J
IPR035543Translation initiation factor eIF-2B subunit epsilon, N-terminalDomain
I, J
IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
I, J
IPR029044Nucleotide-diphospho-sugar transferasesHomologous Superfamily
I, J
IPR051956eIF2B Complex Subunit EpsilonFamily
G, H
IPR000649Initiation factor 2B-relatedFamily
G, H
IPR042529Initiation factor 2B-like, C-terminalHomologous Superfamily
G, H
IPR037171NagB/RpiA transferase-likeHomologous Superfamily
E, F
IPR056764EIF2B subunit epsilon/gamma, LbH domainDomain
E, F
IPR051960Eukaryotic Initiation Factor 2B Subunit GammaFamily
E, F
IPR005835Nucleotidyl transferase domainDomain
E, F
IPR029044Nucleotide-diphospho-sugar transferasesHomologous Superfamily
C, D
IPR051855Eukaryotic initiation factor 2B subunit betaFamily
C, D
IPR000649Initiation factor 2B-relatedFamily
C, D
IPR042529Initiation factor 2B-like, C-terminalHomologous Superfamily
C, D
IPR037171NagB/RpiA transferase-likeHomologous Superfamily
A, B
IPR000649Initiation factor 2B-relatedFamily
A, B
IPR051501Eukaryotic initiation factor 2B subunits alpha/beta/deltaFamily
A, B
IPR042529Initiation factor 2B-like, C-terminalHomologous Superfamily
A, B
IPR037171NagB/RpiA transferase-likeHomologous Superfamily
A, B
IPR042528Translation initiation factor eIF-2B subunit alpha, N-terminalHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
N [auth P]PharosP41091
PharosP20042
K, L
PharosP05198
I, J
PharosQ13144
G, H
PharosQ9UI10
E, F
PharosQ9NR50
C, D
PharosP49770
A, B
PharosQ14232