6XA1

Structure of a drug-like compound stalled human translation termination complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth LH]SCOP2B SuperfamilyRibosomal protein L68033688 3000724 SCOP2B (2022-06-29)
L [auth LI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8100400 3000884 SCOP2B (2022-06-29)
M [auth LJ]SCOP2B SuperfamilyRL5-like8073892 3001709 SCOP2B (2022-06-29)
N [auth LL]SCOP2B SuperfamilyRibosomal protein L13e-like8053155 3002162 SCOP2B (2022-06-29)
P [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8098812 3000210 SCOP2B (2022-06-29)
R [auth LP]SCOP2B SuperfamilyRibosomal protein L228076704 3001078 SCOP2B (2022-06-29)
S [auth LQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095977 3001045 SCOP2B (2022-06-29)
B [auth LB]SCOP2B SuperfamilyTranslational proteins8078351 3000811 SCOP2B (2022-06-29)
W [auth LU]SCOP2 Family60S Ribosomal protein L22e8100025 4006528 SCOP2 (2022-06-29)
W [auth LU]SCOP2 Superfamily60S Ribosomal protein L22e8100026 3002158 SCOP2 (2022-06-29)
X [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like8072050 3000433 SCOP2B (2022-06-29)
Z [auth LX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095967 3000210 SCOP2B (2022-06-29)
AA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076756 3000334 SCOP2B (2022-06-29)
BA [auth LZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053050 3000334 SCOP2B (2022-06-29)
CA [auth La]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077123 3001045 SCOP2B (2022-06-29)
DA [auth Lb]SCOP2B SuperfamilyRibosomal protein L29e8053036 3002157 SCOP2B (2022-06-29)
EA [auth Lc]SCOP2B SuperfamilyL30e-like8077491 3001739 SCOP2B (2022-06-29)
HA [auth Lf]SCOP2B SuperfamilyTranslational proteins8087455 3000811 SCOP2B (2022-06-29)
IA [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like8053540 3002203 SCOP2B (2022-06-29)
KA [auth Li]SCOP2B SuperfamilyRibosomal protein L36e8053120 3002161 SCOP2B (2022-06-29)
MA [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like8053567 3002206 SCOP2B (2022-06-29)
NA [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e8095603 3001756 SCOP2B (2022-06-29)
RA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins8101551 3001320 SCOP2B (2022-06-29)
UA [auth SA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8052791 3001397 SCOP2B (2022-06-29)
VA [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like8053212 3002166 SCOP2B (2022-06-29)
WA [auth SD]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8043545 3001043 SCOP2B (2022-06-29)
XA [auth SE]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052755 3001473 SCOP2B (2022-06-29)
XA [auth SE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052757 3000334 SCOP2B (2022-06-29)
XA [auth SE]SCOP2B SuperfamilyNucleic acid-binding proteins8052756 3000135 SCOP2B (2022-06-29)
YA [auth SF]SCOP2B SuperfamilyRibosomal protein S78066003 3000799 SCOP2B (2022-06-29)
AB [auth SI]SCOP2B Superfamily50S Ribosomal protein L14-like8053077 3000433 SCOP2B (2022-06-29)
BB [auth SK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055714 3000034 SCOP2B (2022-06-29)
CB [auth SL]SCOP2B SuperfamilyNucleic acid-binding proteins8052717 3000135 SCOP2B (2022-06-29)
CB [auth SL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052715 3002138 SCOP2B (2022-06-29)
EB [auth SQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082685 3000100 SCOP2B (2022-06-29)
GB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain8101555 3000053 SCOP2B (2022-06-29)
F [auth LC]SCOP2B SuperfamilyRibosomal protein L48052832 3001146 SCOP2B (2022-06-29)
F [auth LC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052831 3002143 SCOP2B (2022-06-29)
HB [auth ST]SCOP2B SuperfamilyWinged helix DNA-binding domain8089318 3000034 SCOP2B (2022-06-29)
IB [auth SU]SCOP2B SuperfamilyRibosomal protein S108098806 3001336 SCOP2B (2022-06-29)
JB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053139 3000068 SCOP2B (2022-06-29)
LB [auth Sa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053143 3000068 SCOP2B (2022-06-29)
MB [auth Sc]SCOP2B SuperfamilyNucleic acid-binding proteins8063426 3000135 SCOP2B (2022-06-29)
NB [auth Sd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052572 3000068 SCOP2B (2022-06-29)
QB [auth SG]SCOP2B SuperfamilyGS N-terminal domain-like8053171 3000408 SCOP2B (2022-06-29)
G [auth LD]SCOP2B SuperfamilyTranslational machinery components8052887 3000571 SCOP2B (2022-06-29)
SB [auth SM]SCOP2B SuperfamilyL30e-like8063978 3001739 SCOP2B (2022-06-29)
TB [auth SN]SCOP2B SuperfamilyHomeodomain-like8052958 3000001 SCOP2B (2022-06-29)
TB [auth SN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052959 3001284 SCOP2B (2022-06-29)
UB [auth SO]SCOP2B SuperfamilyTranslational machinery components8098844 3000571 SCOP2B (2022-06-29)
VB [auth SW]SCOP2B SuperfamilyRibosomal protein S88095469 3000709 SCOP2B (2022-06-29)
XB [auth SZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8090992 3000034 SCOP2B (2022-06-29)
ZB [auth Se]SCOP2B SuperfamilyRibosomal protein S30e-like8097726 3002190 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053100 3000334 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyRibosomal protein L6e N-terminal domain8053099 3002160 SCOP2B (2022-06-29)
CC [auth j]SCOP2B SuperfamilyN-terminal domain of eukaryotic peptide chain release factor subunit 1 ERF18035419 3001963 SCOP2B (2022-06-29)
CC [auth j]SCOP2B SuperfamilyTranslational machinery components8044552 3000571 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052923 3001378 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052922 3002152 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth LA]PF00181e6xa1LA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
A [auth LA]PF03947e6xa1LA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
J [auth LG]PF01248e6xa1LG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
K [auth LH]PF00347e6xa1LH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
L [auth LI]PF00252e6xa1LI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth LJ]PF00281,PF00673e6xa1LJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
N [auth LL]PF01294e6xa1LL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
O [auth LM]PF00467,PF01929e6xa1LM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
P [auth LN]PF00827e6xa1LN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
Q [auth LO]PF00572e6xa1LO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth LP]PF00237e6xa1LP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth LQ]PF17135e6xa1LQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
B [auth LB]PF00297e6xa1LB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
T [auth LR]PF01280e6xa1LR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
T [auth LR]PF01280e6xa1LR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
U [auth LS]F_UNCLASSIFIEDe6xa1LS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
U [auth LS]PF01775e6xa1LS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
V [auth LT]PF01157e6xa1LT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
W [auth LU]PF01776e6xa1LU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
X [auth LV]PF00238e6xa1LV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
Y [auth LW]PF01246e6xa1LW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
Z [auth LX]PF00276,PF03939e6xa1LX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
AA [auth LY]PF16906e6xa1LY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
BA [auth LZ]PF00467,PF01777e6xa1LZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
CA [auth La]PF00828e6xa1La1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
DA [auth Lb]PF01779e6xa1Lb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
EA [auth Lc]PF01248e6xa1Lc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
FA [auth Ld]PF01198e6xa1Ld1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
GA [auth Le]PF01655e6xa1Le1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
HA [auth Lf]PF01247e6xa1Lf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
IA [auth Lg]PF01199e6xa1Lg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
JA [auth Lh]PF00831e6xa1Lh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
KA [auth Li]PF01158e6xa1Li1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
LA [auth Lj]PF01907e6xa1Lj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
MA [auth Lk]PF01781e6xa1Lk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
NA [auth Ll]PF00832e6xa1Ll1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
OA [auth Lm]PF01020e6xa1Lm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
PA [auth Ln]PF05162e6xa1Ln1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
QA [auth Lo]PF00935e6xa1Lo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
RA [auth Lp]PF01780e6xa1Lp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
SA [auth Lr]PF01778e6xa1Lr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
UA [auth SA]PF00318e6xa1SA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
VA [auth SB]PF01015e6xa1SB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
VA [auth SB]PF01015e6xa1SB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
WA [auth SD]PF00189e6xa1SD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
WA [auth SD]PF07650e6xa1SD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
XA [auth SE]PF00900e6xa1SE3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
XA [auth SE]PF00467,PF16121e6xa1SE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
XA [auth SE]PF00900,PF01479,PF08071e6xa1SE2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
YA [auth SF]PF00177e6xa1SF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
ZA [auth SH]PF01251e6xa1SH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
AB [auth SI]PF01201e6xa1SI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
BB [auth SK]PF03501e6xa1SK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
CB [auth SL]PF00366,PF16205e6xa1SL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
DB [auth SP]PF00203e6xa1SP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
EB [auth SQ]PF00380e6xa1SQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
FB [auth SR]PF00833e6xa1SR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
GB [auth SS]PF00416e6xa1SS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
F [auth LC]PF00573e6xa1LC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth LC]PF14374e6xa1LC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
HB [auth ST]PF01090e6xa1ST1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
IB [auth SU]PF00338e6xa1SU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
JB [auth SV]PF01249e6xa1SV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
KB [auth SX]PF00164e6xa1SX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
LB [auth Sa]PF01283e6xa1Sa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
MB [auth Sc]PF01200e6xa1Sc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
NB [auth Sd]PF00253e6xa1Sd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
OB [auth Sg]PF00400e6xa1Sg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
PB [auth SC]PF03719e6xa1SC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
PB [auth SC]PF00333e6xa1SC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
PB [auth SC]PF00333e6xa1SC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
QB [auth SG]PF01092e6xa1SG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
G [auth LD]PF14204,PF17144e6xa1LD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
RB [auth SJ]PF00163,PF01479e6xa1SJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
SB [auth SM]PF01248e6xa1SM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
TB [auth SN]PF08069e6xa1SN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
TB [auth SN]PF00312e6xa1SN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
UB [auth SO]PF00411e6xa1SO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
VB [auth SW]PF00410e6xa1SW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
VB [auth SW]PF00410e6xa1SW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
WB [auth SY]PF01282e6xa1SY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
XB [auth SZ]PF03297e6xa1SZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
YB [auth Sb]PF01667e6xa1Sb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
ZB [auth Se]PF04758e6xa1Se1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
AC [auth Sf]PF01599e6xa1Sf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
H [auth LE]PF01159,PF03868e6xa1LE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
CC [auth j]PF03465e6xa1j3 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF03465ECOD (1.6)
CC [auth j]PF03463e6xa1j1 A: a+b three layersX: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)H: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)T: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1F: PF03463ECOD (1.6)
CC [auth j]PF03464e6xa1j2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF03464ECOD (1.6)
I [auth LF]PF00327,PF08079e6xa1LF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
A [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
J [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
N [auth LL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
O [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
B [auth LB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
T [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
V [auth LT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
W [auth LU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
X [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Y [auth LW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
Z [auth LX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
Z [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
AA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
BA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BA [auth LZ]PF00467KOW motif (KOW)KOW motif- Family
CA [auth La]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
DA [auth Lb]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
EA [auth Lc]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FA [auth Ld]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
GA [auth Le]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
HA [auth Lf]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
IA [auth Lg]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
JA [auth Lh]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
KA [auth Li]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LA [auth Lj]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MA [auth Lk]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
NA [auth Ll]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
OA [auth Lm]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
PA [auth Ln]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
QA [auth Lo]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
RA [auth Lp]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
SA [auth Lr]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
UA [auth SA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
UA [auth SA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
VA [auth SB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
WA [auth SD]PF07650KH domain (KH_2)KH domain- Domain
WA [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
XA [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
XA [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
XA [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
XA [auth SE]PF00467KOW motif (KOW)KOW motif- Family
YA [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
ZA [auth SH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
AB [auth SI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
BB [auth SK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
CB [auth SL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
CB [auth SL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
DB [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
EB [auth SQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
FB [auth SR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
GB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
F [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HB [auth ST]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
IB [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
JB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
KB [auth SX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
LB [auth Sa]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
MB [auth Sc]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
NB [auth Sd]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
OB [auth Sg]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PB [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
PB [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
QB [auth SG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
G [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RB [auth SJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
RB [auth SJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
SB [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
TB [auth SN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
TB [auth SN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
UB [auth SO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
VB [auth SW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
WB [auth SY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
XB [auth SZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
YB [auth Sb]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
ZB [auth Se]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
AC [auth Sf]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
H [auth LE]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
H [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
CC [auth j]PF03465eRF1 domain 3 (eRF1_3)eRF1 domain 3The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
CC [auth j]PF03463eRF1 domain 1 (eRF1_1)eRF1 domain 1The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
CC [auth j]PF03464eRF1 domain 2 (eRF1_2)eRF1 domain 2The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
I [auth LF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
I [auth LF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth LA]60S ribosomal protein L8
J [auth LG]60S ribosomal protein L7a
K [auth LH]60S ribosomal protein L9
L [auth LI]60S ribosomal protein L10-like
M [auth LJ]60S ribosomal protein L11
N [auth LL]60S ribosomal protein L13
O [auth LM]60S ribosomal protein L14
P [auth LN]60S ribosomal protein L15
Q [auth LO]60S ribosomal protein L13a
R [auth LP]60S ribosomal protein L17
S [auth LQ]60S ribosomal protein L18
B [auth LB]60S ribosomal protein L3
T [auth LR]60S ribosomal protein L19
U [auth LS]60S ribosomal protein L18a
V [auth LT]60S ribosomal protein L21
W [auth LU]Heparin-binding protein HBp15
X [auth LV]60S ribosomal protein L23
Y [auth LW]60S ribosomal protein L24
Z [auth LX]60S ribosomal protein L23a
AA [auth LY]60S ribosomal protein L26
BA [auth LZ]60S ribosomal protein L27
CA [auth La]60S ribosomal protein L27a
C [auth L5]28S rRNA---
DA [auth Lb]60S ribosomal protein L29
EA [auth Lc]60S ribosomal protein L30
FA [auth Ld]60S ribosomal protein L31
GA [auth Le]60S ribosomal protein L32
HA [auth Lf]60S ribosomal protein L35a
IA [auth Lg]60S ribosomal protein L34
JA [auth Lh]60S ribosomal protein L35
KA [auth Li]60S ribosomal protein L36
LA [auth Lj]60S ribosomal protein L37
MA [auth Lk]60S ribosomal protein L38
D [auth L7]5S rRNA---
NA [auth Ll]60S ribosomal protein L39
OA [auth Lm]60S ribosomal protein L40
PA [auth Ln]60S ribosomal protein L41
QA [auth Lo]60S ribosomal protein L36a
RA [auth Lp]60S ribosomal protein L37a
SA [auth Lr]60S ribosomal protein L28
TA [auth S2]18S rRNA---
UA [auth SA]40S ribosomal protein SA
VA [auth SB]40S ribosomal protein S3a
WA [auth SD]40S ribosomal protein S3
E [auth L8]5.8S rRNA---
XA [auth SE]40S ribosomal protein S4, X isoform
YA [auth SF]40S ribosomal protein S5
ZA [auth SH]40S ribosomal protein S7
AB [auth SI]40S ribosomal protein S8
BB [auth SK]40S ribosomal protein S10
CB [auth SL]40S ribosomal protein S11
DB [auth SP]40S ribosomal protein S15
EB [auth SQ]40S ribosomal protein S16
FB [auth SR]40S ribosomal protein S17
GB [auth SS]40S ribosomal protein S18
F [auth LC]60S ribosomal protein L4
HB [auth ST]40S ribosomal protein S19
IB [auth SU]40S ribosomal protein S20
JB [auth SV]40S ribosomal protein S21
KB [auth SX]40S ribosomal protein S23
LB [auth Sa]40S ribosomal protein S26
MB [auth Sc]40S ribosomal protein S28
NB [auth Sd]40S ribosomal protein S29
OB [auth Sg]Receptor of activated protein C kinase 1
PB [auth SC]40S ribosomal protein S2
QB [auth SG]40S ribosomal protein S6
G [auth LD]60S ribosomal protein L5
RB [auth SJ]40S ribosomal protein S9
SB [auth SM]40S ribosomal protein S12
TB [auth SN]40S ribosomal protein S13
UB [auth SO]40S ribosomal protein S14
VB [auth SW]40S ribosomal protein S15a
WB [auth SY]40S ribosomal protein S24
XB [auth SZ]40S ribosomal protein S25
YB [auth Sb]40S ribosomal protein S27
ZB [auth Se]40S ribosomal protein S30
AC [auth Sf]40S ribosomal protein S27a
H [auth LE]60S ribosomal protein L6
BC [auth Bv]P-tRNA---
CC [auth j]Eukaryotic peptide chain release factor subunit 1
DC [auth k]mRNA---
EC [auth NC]Stalled Nascent chain---
I [auth LF]60S ribosomal protein L7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
A [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
A [auth LA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
A [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
A [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
A [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
A [auth LA]IPR002171Large ribosomal subunit protein uL2Family
J [auth LG]IPR001921Large ribosomal subunit protein eL8Family
J [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth LI]IPR047873Large ribosomal subunit protein uL16Family
L [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
L [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
N [auth LL]IPR001380Large ribosomal subunit protein eL13Family
N [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth LM]IPR039660Large ribosomal subunit protein eL14Family
O [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth LN]IPR000439Large ribosomal subunit protein eL15Family
Q [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Q [auth LO]IPR005822Large ribosomal subunit protein uL13Family
Q [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth LP]IPR001063Large ribosomal subunit protein uL22Family
R [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
S [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
S [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
B [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
B [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
B [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
B [auth LB]IPR000597Large ribosomal subunit protein uL3Family
B [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
T [auth LR]IPR039547Large ribosomal subunit protein eL19Family
T [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
T [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth LS]IPR028877Large ribosomal subunit protein eL20Family
U [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
V [auth LT]IPR001147Large ribosomal subunit protein eL21Family
V [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth LU]IPR002671Large ribosomal subunit protein eL22Family
W [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
X [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth LV]IPR000218Large ribosomal subunit protein uL14Family
Y [auth LW]IPR011017TRASH domainDomain
Y [auth LW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth LW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Z [auth LX]IPR019985Large ribosomal subunit protein uL23Family
Z [auth LX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth LY]IPR005824KOWDomain
AA [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
BA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth LZ]IPR005824KOWDomain
BA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth La]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
CA [auth La]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth La]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth La]IPR030878Large ribosomal subunit protein uL15Family
CA [auth La]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
EA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
EA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
FA [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Le]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
GA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
HA [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
IA [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IA [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
JA [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth Lh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
JA [auth Lh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
LA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
MA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
NA [auth Ll]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
NA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
OA [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth Lm]IPR000626Ubiquitin-like domainDomain
OA [auth Lm]IPR019956Ubiquitin domainDomain
OA [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth Ln]IPR007836Large ribosomal subunit protein eS32Family
QA [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth Lo]IPR000552Large ribosomal subunit protein eL42Family
RA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth Lr]IPR029004Ribosomal eL28/Mak16Domain
SA [auth Lr]IPR002672Large ribosomal subunit protein eL28Family
UA [auth SA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
UA [auth SA]IPR001865Small ribosomal subunit protein uS2Family
UA [auth SA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
UA [auth SA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
UA [auth SA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
UA [auth SA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
UA [auth SA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
VA [auth SB]IPR001593Small ribosomal subunit protein eS1Family
VA [auth SB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
VA [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
WA [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
WA [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
WA [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
WA [auth SD]IPR004044K Homology domain, type 2Domain
WA [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
WA [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
WA [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
XA [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
XA [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
XA [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
XA [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
XA [auth SE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
XA [auth SE]IPR002942RNA-binding S4 domainDomain
XA [auth SE]IPR000876Small ribosomal subunit protein eS4Family
XA [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
XA [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
XA [auth SE]IPR005824KOWDomain
YA [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
YA [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
YA [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
YA [auth SF]IPR000235Small ribosomal subunit protein uS7Family
YA [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
ZA [auth SH]IPR000554Small ribosomal subunit protein eS7Family
ZA [auth SH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
AB [auth SI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
AB [auth SI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
AB [auth SI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
AB [auth SI]IPR001047Small ribosomal subunit protein eS8Family
BB [auth SK]IPR037447Small ribosomal subunit protein eS10Family
BB [auth SK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BB [auth SK]IPR005326Plectin/eS10, N-terminalDomain
CB [auth SL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
CB [auth SL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
CB [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CB [auth SL]IPR000266Small ribosomal subunit protein uS17Family
CB [auth SL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
DB [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
DB [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
DB [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
DB [auth SP]IPR002222Small ribosomal subunit protein uS19Family
EB [auth SQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
EB [auth SQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EB [auth SQ]IPR000754Small ribosomal subunit protein uS9Family
EB [auth SQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FB [auth SR]IPR001210Small ribosomal subunit protein eS17Family
FB [auth SR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
FB [auth SR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
GB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
GB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
GB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
GB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
F [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth LC]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HB [auth ST]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
HB [auth ST]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
HB [auth ST]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
HB [auth ST]IPR001266Small ribosomal subunit protein eS19Family
IB [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
IB [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IB [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
IB [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
IB [auth SU]IPR001848Small ribosomal subunit protein uS10Family
JB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
JB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
JB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
KB [auth SX]IPR006032Small ribosomal subunit protein uS12Family
KB [auth SX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KB [auth SX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
LB [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
LB [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
LB [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
MB [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
MB [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MB [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
NB [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
NB [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
NB [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
NB [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
OB [auth Sg]IPR019775WD40 repeat, conserved siteConserved Site
OB [auth Sg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
OB [auth Sg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
OB [auth Sg]IPR020472G-protein beta WD-40 repeatRepeat
OB [auth Sg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
OB [auth Sg]IPR001680WD40 repeatRepeat
PB [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PB [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
PB [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth SC]IPR000851Small ribosomal subunit protein uS5Family
PB [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
PB [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
PB [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
QB [auth SG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
QB [auth SG]IPR001377Small ribosomal subunit protein eS6Family
QB [auth SG]IPR014401Small ribosomal subunit protein eS6-likeFamily
G [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RB [auth SJ]IPR002942RNA-binding S4 domainDomain
RB [auth SJ]IPR022801Small ribosomal subunit protein uS4Family
RB [auth SJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
RB [auth SJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
RB [auth SJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
RB [auth SJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
SB [auth SM]IPR000530Small ribosomal subunit protein eS12Family
SB [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
SB [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
SB [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
TB [auth SN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TB [auth SN]IPR000589Small ribosomal subunit protein uS15Family
TB [auth SN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
TB [auth SN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
UB [auth SO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
UB [auth SO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
UB [auth SO]IPR001971Small ribosomal subunit protein uS11Family
VB [auth SW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
VB [auth SW]IPR000630Small ribosomal subunit protein uS8Family
VB [auth SW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
WB [auth SY]IPR001976Small ribosomal subunit protein eS24Family
WB [auth SY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WB [auth SY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
XB [auth SZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
XB [auth SZ]IPR004977Small ribosomal subunit protein eS25Family
YB [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
YB [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
YB [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Se]IPR006846Small ribosomal subunit protein eS30Family
AC [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
AC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Sf]IPR000626Ubiquitin-like domainDomain
AC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
AC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
AC [auth Sf]IPR019956Ubiquitin domainDomain
AC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
H [auth LE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
H [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth LE]IPR000915Large ribosomal subunit protein eL6Family
CC [auth j]IPR004403Peptide chain release factor eRF1/aRF1Family
CC [auth j]IPR005141eRF1 domain 2Domain
CC [auth j]IPR005140eRF1 domain 1/Pelota-likeDomain
CC [auth j]IPR042226eRF1, domain 2 superfamilyHomologous Superfamily
CC [auth j]IPR024049eRF1, domain 1Homologous Superfamily
CC [auth j]IPR005142eRF1 domain 3Domain
CC [auth j]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
I [auth LF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth LF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth LF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
I [auth LF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth LF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth LF]IPR039699Large ribosomal subunit protein uL30Family
I [auth LF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
J [auth LG]PharosP62424
K [auth LH]PharosP32969
L [auth LI]PharosQ96L21
M [auth LJ]PharosP62913
N [auth LL]PharosP26373
O [auth LM]PharosP50914
P [auth LN]PharosP61313
Q [auth LO]PharosP40429
R [auth LP]PharosP18621
S [auth LQ]PharosQ07020
B [auth LB]PharosP39023
T [auth LR]PharosP84098
V [auth LT]PharosP46778
X [auth LV]PharosP62829
Y [auth LW]PharosP83731
Z [auth LX]PharosP62750
AA [auth LY]PharosP61254
BA [auth LZ]PharosP61353
CA [auth La]PharosP46776
EA [auth Lc]PharosP62888
FA [auth Ld]PharosP62899
GA [auth Le]PharosP62910
HA [auth Lf]PharosP18077
IA [auth Lg]PharosP49207
JA [auth Lh]PharosP42766
KA [auth Li]PharosQ9Y3U8
LA [auth Lj]PharosP61927
MA [auth Lk]PharosP63173
OA [auth Lm]PharosP62987
PA [auth Ln]PharosP62945
QA [auth Lo]PharosP83881
RA [auth Lp]PharosP61513
SA [auth Lr]PharosP46779
UA [auth SA]PharosP08865
WA [auth SD]PharosP23396
XA [auth SE]PharosP62701
YA [auth SF]PharosP46782
ZA [auth SH]PharosP62081
AB [auth SI]PharosP62241
BB [auth SK]PharosP46783
CB [auth SL]PharosP62280
DB [auth SP]PharosP62841
EB [auth SQ]PharosP62249
FB [auth SR]PharosP08708
GB [auth SS]PharosP62269
F [auth LC]PharosP36578
HB [auth ST]PharosP39019
IB [auth SU]PharosP60866
JB [auth SV]PharosP63220
KB [auth SX]PharosP62266
LB [auth Sa]PharosP62854
MB [auth Sc]PharosP62857
NB [auth Sd]PharosP62273
OB [auth Sg]PharosP63244
PB [auth SC]PharosP15880
QB [auth SG]PharosP62753
G [auth LD]PharosP46777
RB [auth SJ]PharosP46781
SB [auth SM]PharosP25398
TB [auth SN]PharosP62277
UB [auth SO]PharosP62263
VB [auth SW]PharosP62244
WB [auth SY]PharosP62847
XB [auth SZ]PharosP62851
YB [auth Sb]PharosP42677
AC [auth Sf]PharosP62979
H [auth LE]PharosQ02878
CC [auth j]PharosP62495
I [auth LF]PharosP18124

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth L5]1MA Parent Component: A

C [auth L5]2MG Parent Component: G

C [auth L5]5MC Parent Component: C

C [auth L5]6MZ Parent Component: A

C [auth L5]A2M Parent Component: A

C [auth L5]OMC Parent Component: C

C [auth L5]OMG Parent Component: G

C [auth L5]OMU Parent Component: U

C [auth L5]PSU Parent Component: U

C [auth L5]UR3 Parent Component: U

C [auth L5]UY1
OA [auth Lm]MLZ Parent Component: LYS

RESIDAA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085
TA [auth S2]4AC RESIDAA0076

TA [auth S2]6MZ Parent Component: A

RESIDAA0076

TA [auth S2]A2M Parent Component: A

RESIDAA0076

TA [auth S2]B8N RESIDAA0076

TA [auth S2]G7M Parent Component: G

RESIDAA0076

TA [auth S2]MA6 Parent Component: A

RESIDAA0076

TA [auth S2]OMC Parent Component: C

RESIDAA0076

TA [auth S2]OMG Parent Component: G

RESIDAA0076

TA [auth S2]OMU Parent Component: U

RESIDAA0076

TA [auth S2]PSU Parent Component: U

RESIDAA0076

E [auth L8]OMG Parent Component: G

RESIDAA0076

E [auth L8]PSU Parent Component: U

RESIDAA0076

F [auth LC]MLZ Parent Component: LYS

RESIDAA0076 , AA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085
JB [auth SV]ACE RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
UB [auth SO]IAS RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]1MA Parent Component: A

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]1MG Parent Component: G

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]2MG Parent Component: G

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]G7M Parent Component: G

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]H2U Parent Component: U

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]M2G Parent Component: G

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]PSU Parent Component: U

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

BC [auth Bv]UY4
CC [auth j]MEQ Parent Component: GLN

RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0071

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N5-methyl-L-glutamine MOD:00080
CC [auth j]UXY RESIDAA0076 , AA0076 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0071