6XWG
Crystal Structure of the Human RXR/RAR DNA-Binding Domain Heterodimer Bound to the Human RARb2 DR5 Response Element
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | zf-C4 | e6xwgC1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: zf-C4 | ECOD (1.6) |
D | zf-C4 | e6xwgD1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: zf-C4 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00105 | Zinc finger, C4 type (two domains) (zf-C4) | Zinc finger, C4 type (two domains) | In nearly all cases, this is the DNA binding domain of a nuclear hormone receptor. The alignment contains two Zinc finger domains that are too dissimilar to be aligned with each other. | Domain | |
PF00105 | Zinc finger, C4 type (two domains) (zf-C4) | Zinc finger, C4 type (two domains) | In nearly all cases, this is the DNA binding domain of a nuclear hormone receptor. The alignment contains two Zinc finger domains that are too dissimilar to be aligned with each other. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
IPR021780 | Nuclear/hormone receptor activator site AF-1 | Domain | |
IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
IPR000003 | Retinoid X receptor/HNF4 | Family | |
IPR001723 | Nuclear hormone receptor | Family | |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily | |
IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
IPR047158 | Retinoic acid receptor, ligand-binding domain | Domain | |
IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
IPR001723 | Nuclear hormone receptor | Family | |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
IPR003078 | Retinoic acid receptor | Family | |
IPR047159 | Retinoic acid receptor, DNA-binding domain | Domain | |
IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily |