Crystal Structure of the Human RXR/RAR DNA-Binding Domain Heterodimer Bound to the Human RARb2 DR5 Response Element
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Ldh_1_C | e6xwgC1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ldh_1_C | ECOD (develop294) |
| D | Ldh_1_C | e6xwgD1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ldh_1_C | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00105 | Double treble clef zinc finger, C4 type (zf-C4) | Double treble clef zinc finger, C4 type | In nearly all cases, this is the DNA binding domain of a nuclear hormone receptor. The alignment contains two Zinc finger domains that are too dissimilar to be aligned with each other. | Domain | |
| PF00105 | Double treble clef zinc finger, C4 type (zf-C4) | Double treble clef zinc finger, C4 type | In nearly all cases, this is the DNA binding domain of a nuclear hormone receptor. The alignment contains two Zinc finger domains that are too dissimilar to be aligned with each other. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
| IPR021780 | Nuclear/hormone receptor activator site AF-1 | Domain | |
| IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
| IPR000003 | Retinoid X receptor/HNF4 | Family | |
| IPR050274 | Nuclear hormone receptor family NR2 subfamily | Family | |
| IPR001723 | Nuclear hormone receptor | Family | |
| IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
| IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily | |
| IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
| IPR047158 | Retinoic acid receptor, ligand-binding domain | Domain | |
| IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
| IPR001723 | Nuclear hormone receptor | Family | |
| IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
| IPR003078 | Retinoic acid receptor | Family | |
| IPR047159 | Retinoic acid receptor, DNA-binding domain | Domain | |
| IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily |














