Annotations: 7Z0E

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth P]	SCOP2B Superfamily	G protein-coupled receptor-like	8039329	3000473	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth P]	PhnJ	e7z0eP1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: PhnJ	ECOD (v295.2)

Chains	Accession	Name	Description	Comments	Source
A [auth P]	PF01036	Bacteriorhodopsin-like protein (Bac_rhodopsin)	Bacteriorhodopsin-like protein	The bacterial opsins are retinal-binding proteins that provide light- dependent ion transport and sensory functions to a family of halophilic bacteria [2,3]. They are integral membrane proteins believed to contain seven transmembrane (TM) domains, th ...	The bacterial opsins are retinal-binding proteins that provide light- dependent ion transport and sensory functions to a family of halophilic bacteria [2,3]. They are integral membrane proteins believed to contain seven transmembrane (TM) domains, the last of which contains the attachment point for retinal (a conserved lysine). This family also includes distantly related proteins that do not contain the retinal binding lysine and so cannot function as opsins. Some fungal examples are: Swiss:O74870, Swiss:P25619, Swiss:P38079, Swiss:Q12117.	Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth P]	Bacteriorhodopsin	light-driven active monoatomic ion transmembrane transporter activity active monoatomic ion transmembrane transporter activity active transmembrane transporter activity primary active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity passive transmembrane transporter activity monoatomic ion channel activity channel activity	phototransduction cellular response to stimulus detection of light stimulus response to light stimulus detection of external stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation response to external stimulus detection of abiotic stimulus cell communication detection of stimulus phototransduction cellular response to stimulus detection of light stimulus response to light stimulus detection of external stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation response to external stimulus detection of abiotic stimulus cell communication detection of stimulus cellular process response to abiotic stimulus response to radiation signal transduction	cell periphery cellular anatomical structure plasma membrane membrane

Chains	Accession	Name	Type
A [auth P]	IPR018229	Rhodopsin, retinal binding site	Binding Site
A [auth P]	IPR001425	Archaeal/bacterial/fungal rhodopsins	Family

Chains	External Link	Comment
A [auth P]	PDBTM	Annotated as membrane protein by PDBTM

Chains	External Link	Comment
A [auth P]	MemProtMD	Annotated as membrane protein by MemProtMD

Chains	Resource Link	Group	Subgroup	Protein
A [auth P]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Bacterial, Algal, Viral, and Unusual Rhodopsins	Bacteriorhodopsin (BR). ground state.

Modified Residue(s)
Chain	Residue(s)	Description
A [auth P]	LYR	Parent Component: LYS : AA0120 : N6-retinylidene-L-lysine MOD:00129

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7Z0E | pdb_00007z0e