Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth 2]SCOP2B SuperfamilyThioredoxin-like8100908 3000031 SCOP2B (2022-06-29)
J [auth c]SCOP2B SuperfamilyNADH-ubiquinone oxidoreductase-like8053980 3002258 SCOP2B (2022-06-29)
R [auth A]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8106704 3002200 SCOP2B (2022-06-29)
S [auth H]SCOP2B SuperfamilyAntiporter subunits half-channel-like8054146 3002280 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8053518 3002200 SCOP2B (2022-06-29)
U [auth K]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8053514 3002200 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like8048258 3002280 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like8047664 3002280 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like8048501 3002280 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like8054155 3002280 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like8047670 3002280 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like8054160 3002280 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 1]PF10589e7zdm11 A: alpha bundlesX: Bromodomain-likeH: Nqo1C-terminal domain-like (From Topology)T: Nqo1C-terminal domain-likeF: PF10589ECOD (1.6)
A [auth 1]PF22461e7zdm13 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Nqo1 middle domain-likeF: PF22461ECOD (1.6)
A [auth 1]PF01512e7zdm12 A: a/b three-layered sandwichesX: Nqo1 FMN-binding domain-like (From Topology)H: Nqo1 FMN-binding domain-like (From Topology)T: Nqo1 FMN-binding domain-likeF: PF01512ECOD (1.6)
B [auth 2]PF01257e7zdm21 A: alpha bundlesX: NQO2 helical bundle domain (From Topology)H: NQO2 helical bundle domain (From Topology)T: NQO2 helical bundle domainF: PF01257ECOD (1.6)
B [auth 2]PF01257e7zdm22 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF01257ECOD (1.6)
C [auth 3]PF22117e7zdm31 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF22117ECOD (1.6)
C [auth 3]PF13510e7zdm33 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF13510ECOD (1.6)
C [auth 3]PF22151e7zdm34 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: PF22151ECOD (1.6)
C [auth 3]PF00384e7zdm35 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384ECOD (1.6)
C [auth 3]PF00384,PF09326e7zdm36 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384,PF09326ECOD (1.6)
C [auth 3]PF10588e7zdm32 A: extended segmentsX: iron-sulfur center-binding helical hairpin (From Topology)H: iron-sulfur center-binding helical hairpin (From Topology)T: iron-sulfur center-binding helical hairpinF: PF10588ECOD (1.6)
F [auth 6]PF01058e7zdm61 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF01058ECOD (1.6)
G [auth 9]PF00037e7zdm91 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
J [auth c]PF04800e7zdmc1 A: a+b two layersX: Putative oxidoreductase (From Topology)H: Putative oxidoreductase (From Topology)T: Putative oxidoreductaseF: PF04800ECOD (1.6)
K [auth d]PF01370e7zdmd1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: PF01370ECOD (1.6)
L [auth e]PF05047e7zdme1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
M [auth f]PF04716e7zdmf1 A: extended segmentsX: FATC domain (From Topology)H: FATC domain (From Topology)T: FATC domainF: PF04716ECOD (1.6)
N [auth g]PF05347e7zdmg1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: PF05347ECOD (1.6)
P [auth i]PF05071e7zdmi1 A: a+b three layersX: Mitochondrial complex I, B17.2 subunit (From Topology)H: Mitochondrial complex I, B17.2 subunit (From Topology)T: Mitochondrial complex I, B17.2 subunitF: PF05071ECOD (1.6)
AA [auth X]PF00550e7zdmX1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
Q [auth j]PF00550e7zdmj1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
R [auth A]PF00507e7zdmA1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: PF00507ECOD (1.6)
S [auth H]PF00146e7zdmH1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: PF00146ECOD (1.6)
T [auth J]PF00499e7zdmJ1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: PF00499ECOD (1.6)
U [auth K]PF00420e7zdmK1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: PF00420ECOD (1.6)
V [auth L]PF00361,PF00662,PF06455e7zdmL1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF00662,PF06455ECOD (1.6)
W [auth M]PF00361,PF01059e7zdmM1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF01059ECOD (1.6)
X [auth N]PF00361,PF06444e7zdmN1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF06444ECOD (1.6)
Z [auth W]PF09781e7zdmW1 A: extended segmentsX: Mitochondrial complex I, SGDH subunit (From Topology)H: Mitochondrial complex I, SGDH subunit (From Topology)T: Mitochondrial complex I, SGDH subunitF: PF09781ECOD (1.6)
BA [auth Y]PF06747e7zdmY1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
CA [auth Z]PF10249e7zdmZ1 A: alpha bundlesX: Mitochondrial complex I, PDSW subunit (From Topology)H: Mitochondrial complex I, PDSW subunit (From Topology)T: Mitochondrial complex I, PDSW subunitF: PF10249ECOD (1.6)
DA [auth k]PF01712e7zdmk1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF01712ECOD (1.6)
EA [auth l]PF10200e7zdml1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: CHCH domain (From Topology)T: CHCH domainF: PF10200ECOD (1.6)
FA [auth m]PF14987e7zdmm1 A: extended segmentsX: Mitochondrial complex I, B9 subunit (From Topology)H: Mitochondrial complex I, B9 subunit (From Topology)T: Mitochondrial complex I, B9 subunitF: PF14987ECOD (1.6)
HA [auth o]PF06374e7zdmo1 A: extended segmentsX: Mitochondrial complex I, B14.5b subunit (From Topology)H: Mitochondrial complex I, B14.5b subunit (From Topology)T: Mitochondrial complex I, B14.5b subunitF: PF06374ECOD (1.6)
JA [auth q]PF06212e7zdmq1 A: extended segmentsX: Mitochondrial complex I, B16.6 subunit (From Topology)H: Mitochondrial complex I, B16.6 subunit (From Topology)T: Mitochondrial complex I, B16.6 subunitF: PF06212ECOD (1.6)
MA [auth t]PF05347e7zdmt1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: PF05347ECOD (1.6)
NA [auth u]PF14813e7zdmu1 A: extended segmentsX: Mitochondrial complex I, AGGG subunit (From Topology)H: Mitochondrial complex I, AGGG subunit (From Topology)T: Mitochondrial complex I, AGGG subunitF: PF14813ECOD (1.6)
QA [auth x]PF15088e7zdmx1 A: extended segmentsX: Mitochondrial complex I, KFYI subunit (From Topology)H: Mitochondrial complex I, KFYI subunit (From Topology)T: Mitochondrial complex I, KFYI subunitF: PF15088ECOD (1.6)
RA [auth y]PF08040e7zdmy1 A: extended segmentsX: Mitochondrial complex I, MNLL subunit (From Topology)H: Mitochondrial complex I, MNLL subunit (From Topology)T: Mitochondrial complex I, MNLL subunitF: PF08040ECOD (1.6)
SA [auth z]PF15879e7zdmz1 A: extended segmentsX: Mitochondrial complex I, MWFE subunit (From Topology)H: Mitochondrial complex I, MWFE subunit (From Topology)T: Mitochondrial complex I, MWFE subunitF: PF15879ECOD (1.6)
E [auth 5]PF00329e7zdm51 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: PF00329ECOD (1.6)
I [auth b]PF10276e7zdmb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF10276ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 1]PF10531SLBB domain (SLBB)SLBB domain- Domain
A [auth 1]PF01512Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K)Respiratory-chain NADH dehydrogenase 51 Kd subunit- Family
A [auth 1]PF10589NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)NADH-ubiquinone oxidoreductase-F iron-sulfur binding region- Domain
B [auth 2]PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
D [auth 4]PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
F [auth 6]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
G [auth 9]PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
H [auth a]PF15880NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial (NDUFV3)NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial- Family
J [auth c]PF04800NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)NADH dehydrogenase ubiquinone Fe-S protein 4- Family
K [auth d]PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family
L [auth e]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
M [auth f]PF04716ETC complex I subunit conserved region (ETC_C1_NDUFA5)ETC complex I subunit conserved region- Family
N [auth g]PF13233Complex1_LYR-like (Complex1_LYR_2)Complex1_LYR-like- Family
P [auth i]PF05071NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12)NADH ubiquinone oxidoreductase subunit NDUFA12- Family
AA [auth X],
Q [auth j]
PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
R [auth A]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
S [auth H]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
T [auth J]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
U [auth K]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
V [auth L]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
V [auth L]PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminus- Family
V [auth L]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
W [auth M]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
W [auth M]PF01059NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N)NADH-ubiquinone oxidoreductase chain 4, amino terminus- Family
X [auth N]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
X [auth N]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminus- Family
Y [auth V]PF02466Tim17/Tim22/Tim23/Pmp24 family (Tim17)Tim17/Tim22/Tim23/Pmp24 family- Family
Z [auth W]PF09781NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit (NDUF_B5)NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit- Family
BA [auth Y]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
CA [auth Z]PF10249NADH-ubiquinone oxidoreductase subunit 10 (NDUFB10)NADH-ubiquinone oxidoreductase subunit 10- Family
DA [auth k]PF01712Deoxynucleoside kinase (dNK)Deoxynucleoside kinaseThis family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ...This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.
Domain
EA [auth l]PF10200NADH:ubiquinone oxidoreductase, NDUFS5-15kDa (Ndufs5)NADH:ubiquinone oxidoreductase, NDUFS5-15kDa- Family
FA [auth m]PF14987NADH dehydrogenase 1 alpha subcomplex subunit 3 (NADHdh_A3)NADH dehydrogenase 1 alpha subcomplex subunit 3- Family
GA [auth n]PF08122NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12)NADH-ubiquinone oxidoreductase B12 subunit family- Family
HA [auth o]PF06374NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) (NDUF_C2)NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2)- Family
IA [auth p]PF07225NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) (NDUF_B4)NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)- Family
JA [auth q]PF06212GRIM-19 protein (GRIM-19)GRIM-19 protein- Family
KA [auth r]PF09782NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit (NDUF_B6)NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit- Family
LA [auth s]PF05676NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7)NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)- Family
MA [auth t]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
NA [auth u]PF14813NADH dehydrogenase 1 beta subcomplex subunit 2 (NADH_B2)NADH dehydrogenase 1 beta subcomplex subunit 2- Family
OA [auth v]PF05821NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) (NDUF_B8)NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)- Family
PA [auth w]PF10183ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS)ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)- Family
QA [auth x]PF15088NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial (NADH_dh_m_C1)NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial- Family
RA [auth y]PF08040MNLL subunit (NADH_oxidored)MNLL subunit- Family
SA [auth z]PF15879NADH-ubiquinone oxidoreductase MWFE subunit (MWFE)NADH-ubiquinone oxidoreductase MWFE subunit- Family
O [auth h]PF07347NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) (CI-B14_5a)NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)- Family
E [auth 5]PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunit- Family
I [auth b]PF10276Zinc-finger domain (zf-CHCC)Zinc-finger domainThis is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial -
B [auth 2]Mitochondrial complex I, 24 kDa subunit - -
C [auth 3]NADH:ubiquinone oxidoreductase core subunit S1---
D [auth 4]Complex I-49kD -
F [auth 6]Complex I-20kD - -
G [auth 9]Complex I-23kD -
H [auth a]Complex I-9kD- -
J [auth c]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-
K [auth d]NADH:ubiquinone oxidoreductase subunit A9
L [auth e]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2- -
M [auth f]Mitochondrial complex I, B13 subunit-
N [auth g]NADH:ubiquinone oxidoreductase subunit A6-
P [auth i]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-
AA [auth X],
Q [auth j]
Acyl carrier protein- -
R [auth A]NADH-ubiquinone oxidoreductase chain 3
S [auth H]NADH-ubiquinone oxidoreductase chain 1
T [auth J]NADH-ubiquinone oxidoreductase chain 6
U [auth K]NADH-ubiquinone oxidoreductase chain 4L
V [auth L]NADH-ubiquinone oxidoreductase chain 5
W [auth M]NADH-ubiquinone oxidoreductase chain 4
X [auth N]NADH-ubiquinone oxidoreductase chain 2
Y [auth V]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-
Z [auth W]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial- -
BA [auth Y]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
CA [auth Z]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10- -
DA [auth k]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-
EA [auth l]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5- -
FA [auth m]NADH:ubiquinone oxidoreductase subunit A3- -
GA [auth n]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-
HA [auth o]NADH dehydrogenase [ubiquinone] 1 subunit C2-
IA [auth p]NADH:ubiquinone oxidoreductase subunit B4- -
JA [auth q]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13- -
KA [auth r]Mitochondrial complex I, B17 subunit-
LA [auth s]NADH:ubiquinone oxidoreductase subunit B7
MA [auth t]NADH:ubiquinone oxidoreductase subunit B9-
NA [auth u]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-
OA [auth v]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-
PA [auth w]Mitochondrial complex I, ESSS subunit- -
QA [auth x]NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial- -
RA [auth y]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1- -
SA [auth z]Complex I-MWFE- -
O [auth h]Mitochondrial complex I, B14.5a subunit-
E [auth 5]NADH:ubiquinone oxidoreductase core subunit S3 - -
I [auth b]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
A [auth 1]IPR019554Soluble ligand binding domainDomain
A [auth 1]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
A [auth 1]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
A [auth 1]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
A [auth 1]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
A [auth 1]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
B [auth 2]IPR042128NuoE domainDomain
B [auth 2]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
B [auth 2]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
B [auth 2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
D [auth 4]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
D [auth 4]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
D [auth 4]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
D [auth 4]IPR001135NADH-quinone oxidoreductase, subunit DDomain
F [auth 6]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
F [auth 6]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
G [auth 9]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
G [auth 9]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
G [auth 9]IPR010226NADH-quinone oxidoreductase, chain IFamily
H [auth a]IPR026193NADH-ubiquinone oxidoreductase flavoprotein 3Family
J [auth c]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
J [auth c]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
K [auth d]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
K [auth d]IPR001509NAD-dependent epimerase/dehydrataseDomain
L [auth e]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
L [auth e]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
L [auth e]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
M [auth f]IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5Family
N [auth g]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
N [auth g]IPR045299NDUFA6, LYR domainDomain
P [auth i]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
AA [auth X],
Q [auth j]
IPR006162Phosphopantetheine attachment sitePTM
AA [auth X],
Q [auth j]
IPR009081Phosphopantetheine binding ACP domainDomain
AA [auth X],
Q [auth j]
IPR036736ACP-like superfamilyHomologous Superfamily
AA [auth X],
Q [auth j]
IPR003231Acyl carrier proteinFamily
R [auth A]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
R [auth A]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
S [auth H]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
S [auth H]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
T [auth J]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
T [auth J]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
U [auth K]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
U [auth K]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
V [auth L]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
V [auth L]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
V [auth L]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
V [auth L]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
V [auth L]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
W [auth M]IPR003918NADH:ubiquinone oxidoreductaseFamily
W [auth M]IPR010227NADH-quinone oxidoreductase, chain M/4Family
W [auth M]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
W [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
X [auth N]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
X [auth N]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
X [auth N]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
Y [auth V]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
Z [auth W]IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
BA [auth Y]IPR010625CHCHDomain
BA [auth Y]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
CA [auth Z]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
CA [auth Z]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
DA [auth k]IPR031314Deoxynucleoside kinase domainDomain
DA [auth k]IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
DA [auth k]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EA [auth l]IPR024132AkirinFamily
EA [auth l]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
FA [auth m]IPR026626NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3Family
GA [auth n]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
HA [auth o]IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2Family
IA [auth p]IPR009866NADH:ubiquinone oxidoreductase, subunit NDUFB4Family
JA [auth q]IPR009346GRIM-19Family
KA [auth r]IPR019174NADH dehydrogenase 1, beta subcomplex, subunit 6Family
LA [auth s]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
MA [auth t]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
MA [auth t]IPR008011Complex 1 LYR protein domainDomain
MA [auth t]IPR045292NDUFB9, LYR domainDomain
NA [auth u]IPR026627NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal typeFamily
OA [auth v]IPR008699NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Family
OA [auth v]IPR016551NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoaFamily
PA [auth w]IPR019329NADH:ubiquinone oxidoreductase, ESSS subunitFamily
QA [auth x]IPR026192NADH-ubiquinone oxidoreductase 1 subunit C1Family
RA [auth y]IPR012575NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1Family
SA [auth z]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
O [auth h]IPR009947NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7Family
E [auth 5]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
E [auth 5]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
E [auth 5]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
E [auth 5]IPR010218NADH dehydrogenase, subunit CFamily
I [auth b]IPR019401Zinc finger, CHCC-typeDomain
I [auth b]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D [auth 4]2MR Parent Component: ARG

RESIDAA0067

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076
U [auth K]FME Parent Component: MET

RESIDAA0067 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
V [auth L]FME Parent Component: MET

RESIDAA0067 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
W [auth M]FME Parent Component: MET

RESIDAA0067 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
Y [auth V]AYA Parent Component: ALA

RESIDAA0067 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566

DA [auth k]SEP Parent Component: SER

RESIDAA0067 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046
O [auth h]AYA Parent Component: ALA

RESIDAA0067 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037