2MVW

Solution structure of the TRIM19 B-box1 (B1) of human promyelocytic leukemia (PML)

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
2	2D 1H-13C HSQC	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
3	3D CBCA(CO)NH	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
4	3D HNCO	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
5	3D HNCA	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
6	3D H(CCO)NH	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
7	3D C(CO)NH	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
8	3D 1H-15N TOCSY	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
9	3D 1H-15N NOESY	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
10	2D 1H-1H COSY	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
11	2D 1H-1H NOESY	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
12	3D 1H-13C NOESY aliphatic	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298
13	3D 1H-13C NOESY aliphatic	1 mM [U-99% 13C; U-99% 15N] PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	100% D2O		7.0	ambient	298
14	13C-edited/12C-filtered 3D NOESY-HSQC	0.5 mM [U-99% 13C; U-99% 15N] PML B1 box, 0.5 mM PML B1 box, 25 mM [U-98% 2H] TRIS, 100 mM sodium chloride, 0.2 mM TCEP, 1 mM zinc chloride	90% H2O/10% D2O		7.0	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker		600
2	Bruker		800
3	Bruker		850

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	geometry optimization	CYANA	3.9	Guntert, Mumenthaler and Wuthrich
2	refinement	X-PLOR NIH	2.26	Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift assignment	Sparky	3.114	Goddard
4	data analysis	Procheck	3.5.4	Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton
5	data analysis	TALOS	1.2009.0721.18	Cornilescu, Delaglio and Bax