2MVW | pdb_00002mvw

Solution structure of the TRIM19 B-box1 (B1) of human promyelocytic leukemia (PML)

• PDB DOI: https://doi.org/10.2210/pdb2MVW/pdb
• BMRB: 25288

• Classification: METAL BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-10-17 Released: 2014-11-12 
• Deposition Author(s): Huang, S., Naik, M.T., Fan, P., Wang, Y., Chang, C., Huang, T.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

The B-box 1 dimer of human promyelocytic leukemia protein.

Huang, S.Y., Naik, M.T., Chang, C.F., Fang, P.J., Wang, Y.H., Shih, H.M., Huang, T.H.

(2014) J Biomol NMR 60: 275-281

• PubMed: 25355412 
• DOI: https://doi.org/10.1007/s10858-014-9869-4
• Primary Citation Related Structures: 
  2MVW

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Organizational Affiliation: 
• Institute of Biomedical Sciences, Academia Sinica, Nankang, Taipei, 11529, Taiwan, ROC.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 12.15 kDa 
• Atom Count: 832 
• Modeled Residue Count: 102 
• Deposited Residue Count: 102 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein PML	A, B	51	Homo sapiens	Mutation(s): 0  Gene Names: PML, MYL, PP8675, RNF71, TRIM19 EC: 2.3.2
UniProt & NIH Common Fund Data Resources
Find proteins for P29590 (Homo sapiens) Explore P29590  Go to UniProtKB:  P29590
PHAROS:  P29590 GTEx:  ENSG00000140464

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	C [auth A], D [auth A], E [auth B], F [auth B]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-11-12 
Deposition Author(s): Huang, S., Naik, M.T., Fan, P., Wang, Y., Chang, C., Huang, T.

Revision History  

• Version 1.0: 2014-11-12
  Type: Initial release
  
• Version 1.1: 2014-12-10
  Changes: Database references
• Version 1.2: 2023-06-14
  Changes: Data collection, Database references, Derived calculations, Other
• Version 1.3: 2024-05-15
  Changes: Data collection, Database references