XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 2CDC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2CDC_XYP_A_1369 | 63% | 41% | 0.141 | 0.938 | 1.21 | 1.09 | 1 | - | 0 | 0 | 100% | 0.5 |
| 2CDC_XYP_B_1369 | 55% | 52% | 0.123 | 0.891 | 1.17 | 0.72 | 2 | - | 0 | 0 | 100% | 1 |
| 2CDC_XYP_C_1369 | 53% | 53% | 0.139 | 0.901 | 1.12 | 0.73 | - | - | 0 | 0 | 100% | 1 |
| 2CDC_XYP_D_1370 | 42% | 48% | 0.165 | 0.884 | 1.18 | 0.83 | 1 | - | 0 | 0 | 100% | 0.5 |
| 1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
| 1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
| 8Y00_XYP_D_201 | 99% | 28% | 0.032 | 0.986 | 0.63 | 2.19 | - | 7 | 1 | 0 | 90% | 0.9 |
| 2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
| 1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |
