XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 2CDC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 2CDC_XYS_D_1371 | 99% | 51% | 0.037 | 0.984 | 0.87 | 0.89 | 1 | - | 0 | 0 | 100% | 1 |
| 2CDC_XYS_A_1368 | 99% | 47% | 0.038 | 0.985 | 1.06 | 0.88 | 1 | - | 1 | 0 | 100% | 0.5 |
| 2CDC_XYS_A_1370 | 99% | 49% | 0.041 | 0.984 | 0.77 | 1.08 | - | 1 | 0 | 0 | 100% | 1 |
| 2CDC_XYS_C_1370 | 99% | 44% | 0.041 | 0.981 | 1.04 | 1.03 | 1 | 1 | 0 | 0 | 100% | 1 |
| 2CDC_XYS_B_1370 | 98% | 46% | 0.043 | 0.979 | 1.15 | 0.83 | 1 | - | 0 | 0 | 100% | 1 |
| 2CDC_XYS_D_1369 | 98% | 49% | 0.05 | 0.981 | 1.1 | 0.79 | 1 | - | 0 | 0 | 100% | 0.5 |
| 1W9T_XYS_B_1146 | 100% | 42% | 0.033 | 0.988 | 0.79 | 1.34 | - | 1 | 3 | 0 | 100% | 0.5 |
| 6T8E_XYS_C_505 | 99% | 36% | 0.036 | 0.985 | 1.11 | 1.3 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8OZ1_XYS_A_804 | 99% | 59% | 0.031 | 0.99 | 0.82 | 0.62 | - | - | 0 | 0 | 90% | 1 |
| 5L6G_XYS_A_512 | 99% | 62% | 0.042 | 0.981 | 0.45 | 0.84 | - | 1 | 0 | 0 | 100% | 1 |
| 7PLC_XYS_C_302 | 90% | 63% | 0.061 | 0.949 | 0.55 | 0.7 | - | - | 1 | 0 | 100% | 1 |