Ligand validation:2DB4

LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG is a Ligand Of Interest in 2DB4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
2DB4_LHG_I_203	7%	43%	0.228	0.724	1.08	1.12	2	3	0	82%	0.8163
2DB4_LHG_J_203	7%	43%	0.262	0.757	1.08	1.12	2	3	0	82%	0.8163
2DB4_LHG_B_203	5%	43%	0.301	0.741	1.08	1.13	2	3	0	82%	0.8163
2DB4_LHG_C_205	4%	44%	0.299	0.705	1.07	1.11	2	3	0	82%	0.8163
2DB4_LHG_G_204	4%	43%	0.301	0.698	1.07	1.14	2	3	0	82%	0.8163
2DB4_LHG_C_203	4%	43%	0.343	0.737	1.09	1.1	2	3	0	82%	0.8163
2DB4_LHG_F_203	3%	44%	0.337	0.718	1.08	1.1	2	3	0	82%	0.8163
2DB4_LHG_F_205	3%	43%	0.333	0.688	1.08	1.12	2	3	0	82%	0.8163
2DB4_LHG_D_204	2%	43%	0.348	0.678	1.08	1.12	2	3	0	82%	0.8163
2DB4_LHG_A_203	1%	43%	0.333	0.57	1.08	1.13	2	3	0	82%	0.8163
2DB4_LHG_D_203	0%	45%	0.45	0.536	1.05	1.06	2	2	6	82%	0.8163
2DB4_LHG_E_203	0%	45%	0.429	0.501	1.05	1.06	2	2	6	82%	0.8163
2DB4_LHG_F_204	0%	46%	0.494	0.532	1.04	1.06	2	2	6	82%	0.8163
2DB4_LHG_J_204	0%	46%	0.368	0.393	1.05	1.02	2	2	4	82%	0.8163
2DB4_LHG_C_204	0%	46%	0.489	0.397	1.04	1.05	2	2	6	82%	0.8163
2DB4_LHG_G_203	0%	46%	0.505	0.303	1.04	1.06	2	2	7	82%	0.8163
2DB4_LHG_I_204	0%	45%	0.511	0.306	1.05	1.07	2	2	4	82%	0.8163
2DB4_LHG_H_203	0%	45%	0.504	0.286	1.05	1.07	2	2	5	82%	0.8163
2DB4_LHG_A_204	0%	45%	0.521	0.191	1.05	1.06	2	2	7	82%	0.8163
2DB4_LHG_B_204	0%	45%	0.519	0.151	1.05	1.06	2	2	6	82%	0.8163
2CYD_LHG_F_5159	4%	45%	0.313	0.736	1.05	1.07	2	2	6	82%	0.8163
2BL2_LHG_C_1158	3%	49%	0.263	0.617	0.98	0.98	2	2	2	100%	1
5V2C_LHG_l_101	98%	46%	0.068	0.987	0.91	1.18	2	3	0	100%	1
7RF1_LHG_D_410	91%	47%	0.087	0.974	0.92	1.14	2	5	0	100%	1
8IRC_LHG_L_101	91%	47%	0.092	0.978	0.88	1.15	2	4	0	100%	1
5B66_LHG_l_102	91%	54%	0.084	0.969	0.78	1	2	2	0	100%	1
4IL6_LHG_B_621	91%	52%	0.088	0.973	0.93	0.93	2	2	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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2DB4

LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG is a Ligand Of Interest in 2DB4 designated by the RCSB