DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 3KZI designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3KZI_DGD_C_491Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3KZI_DGD_C_491Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3KZI_DGD_C_491Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3KZI_DGD_C_491 15% 8% 0.278 0.8751.63 2.98 9 23 17080%1
3KZI_DGD_C_493 7% 9% 0.347 0.8091.44 3.04 16 28 391100%1
3KZI_DGD_B_528 6% 56% 0.359 0.8170.6 1.07 2 828088%1
3KZI_DGD_B_533 5% 21% 0.354 0.7761.49 1.83 13 19 190100%1
3KZI_DGD_C_492 5% 11% 0.365 0.7721.36 2.78 10 21 14194%1
3KZI_DGD_C_474 2% 4% 0.423 0.7062.08 3.57 15 24 8085%1
3KZI_DGD_D_362 1% 8% 0.546 0.7072.09 2.55 22 21 0095%1
3KZI_DGD_A_375 1% 8% 0.638 0.7792.05 2.5 14 22 1079%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
7YQ7_DGD_C_518 87% 51% 0.084 0.9670.83 1.07 3 50094%1
5B5E_DGD_c_919 87% 44% 0.076 0.9570.94 1.23 3 100094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1