DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4UB8 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4UB8_DGD_C_519 | 80% | 52% | 0.088 | 0.951 | 0.82 | 0.89 | 2 | 3 | 2 | 0 | 94% | 1 |
| 4UB8_DGD_c_517 | 75% | 47% | 0.095 | 0.943 | 0.85 | 1.09 | 2 | 6 | 0 | 0 | 94% | 1 |
| 4UB8_DGD_c_519 | 75% | 49% | 0.094 | 0.94 | 0.89 | 0.98 | 2 | 3 | 2 | 0 | 94% | 1 |
| 4UB8_DGD_C_517 | 73% | 48% | 0.104 | 0.944 | 0.85 | 1.06 | 2 | 4 | 4 | 0 | 94% | 1 |
| 4UB8_DGD_c_518 | 67% | 48% | 0.11 | 0.931 | 0.9 | 0.99 | 3 | 4 | 3 | 0 | 94% | 1 |
| 4UB8_DGD_C_518 | 67% | 47% | 0.11 | 0.931 | 0.89 | 1.03 | 2 | 5 | 2 | 0 | 94% | 1 |
| 4UB8_DGD_H_102 | 67% | 50% | 0.098 | 0.917 | 0.94 | 0.9 | 3 | 3 | 2 | 0 | 94% | 1 |
| 4UB8_DGD_h_102 | 66% | 48% | 0.105 | 0.923 | 0.9 | 1 | 3 | 6 | 0 | 0 | 94% | 1 |
| 4UB8_DGD_d_407 | 7% | 46% | 0.209 | 0.678 | 0.94 | 1.05 | 3 | 7 | 6 | 0 | 94% | 1 |
| 4UB8_DGD_D_407 | 5% | 39% | 0.231 | 0.651 | 0.97 | 1.3 | 4 | 9 | 1 | 0 | 94% | 1 |
| 5V2C_DGD_C_516 | 97% | 40% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 94% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 94% | 47% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 6JLO_DGD_c_519 | 93% | 48% | 0.067 | 0.981 | 0.83 | 1.05 | 2 | 7 | 6 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 91% | 44% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
| 7M76_DGD_L_207 | 98% | 40% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1PPR_DGD_O_625 | 92% | 52% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
