SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4UB8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4UB8_SQD_A_411 | 57% | 35% | 0.139 | 0.915 | 0.9 | 1.56 | 2 | 11 | 2 | 0 | 100% | 1 |
| 4UB8_SQD_a_411 | 48% | 34% | 0.147 | 0.89 | 0.89 | 1.58 | 2 | 10 | 5 | 0 | 100% | 1 |
| 4UB8_SQD_A_416 | 33% | 42% | 0.15 | 0.831 | 0.99 | 1.14 | 2 | 5 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_b_601 | 31% | 32% | 0.161 | 0.83 | 0.97 | 1.59 | 2 | 9 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_a_402 | 21% | 42% | 0.163 | 0.773 | 0.97 | 1.17 | 2 | 5 | 0 | 0 | 100% | 1 |
| 4UB8_SQD_l_101 | 21% | 38% | 0.177 | 0.787 | 0.95 | 1.36 | 2 | 9 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_F_101 | 20% | 32% | 0.185 | 0.832 | 1.08 | 1.52 | 2 | 9 | 4 | 0 | 80% | 1 |
| 4UB8_SQD_f_101 | 18% | 34% | 0.19 | 0.823 | 1.11 | 1.41 | 2 | 7 | 4 | 0 | 80% | 1 |
| 5V2C_SQD_A_612 | 95% | 22% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 89% | 28% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_B_636 | 88% | 41% | 0.084 | 0.966 | 1.01 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 88% | 28% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 86% | 28% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 85% | 30% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |