Ligand validation:6WYD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
6WYD_NAG_G_606	77%	19%	0.061	0.96	1.24	2.13	3	6	4	93%	1
6WYD_NAG_E_601	68%	13%	0.072	0.938	1.25	2.67	1	7	3	93%	1
6WYD_NAG_B_607	62%	18%	0.086	0.934	1.19	2.27	1	9	4	93%	1
6WYD_NAG_B_604	61%	8%	0.081	0.922	1.03	3.59	1	9	8	93%	1
6WYD_NAG_I_608	59%	6%	0.087	0.924	1.59	3.28	3	6	6	93%	1
6WYD_NAG_G_603	56%	8%	0.094	0.921	1.42	3.07	2	9	9	93%	1
6WYD_NAG_E_608	56%	7%	0.094	0.919	0.97	3.8	-	5	9	93%	1
6WYD_NAG_I_601	51%	23%	0.104	0.91	1.19	1.96	1	5	5	93%	1
6WYD_NAG_B_602	47%	8%	0.113	0.909	1.34	3.29	2	8	3	93%	1
6WYD_NAG_B_601	37%	11%	0.111	0.852	1.87	2.31	5	5	0	93%	1
6WYD_NAG_I_606	34%	12%	0.117	0.849	1.35	2.63	2	9	2	93%	1
6WYD_NAG_G_601	31%	13%	0.132	0.854	1.48	2.37	1	8	1	93%	1
6WYD_NAG_I_605	23%	23%	0.137	0.816	1.4	1.79	3	5	1	93%	1
6WYD_NAG_E_605	21%	12%	0.129	0.792	1.65	2.4	3	6	1	93%	1
6WYD_NAG_E_606	19%	14%	0.158	0.827	1.09	2.71	1	9	2	93%	1
6WYD_NAG_I_607	8%	16%	0.147	0.702	1.59	1.98	3	7	0	93%	1
6WYD_NAG_G_602	8%	18%	0.184	0.764	1.37	2.06	3	4	2	93%	1
6WYD_NAG_E_607	6%	19%	0.161	0.683	1.45	1.96	3	6	0	93%	1
6WYD_NAG_B_603	1%	14%	0.179	0.47	1.28	2.53	1	5	0	93%	1
4DL1_NAG_D_603	99%	57%	0.023	0.992	0.49	0.96	-	1	0	100%	1
6WY7_NAG_E_601	73%	71%	0.063	0.929	0.26	0.69	-	1	0	100%	1
5QJ2_NAG_B_605	70%	25%	0.073	0.951	0.88	2.14	-	6	4	93%	1
7NI3_NAG_C_605	69%	67%	0.071	0.927	0.33	0.74	-	1	0	100%	1
4C1M_NAG_C_1620	69%	37%	0.075	0.933	0.66	1.71	-	6	0	100%	1
2QFR_NAG_B_451	100%	63%	0.013	0.998	0.49	0.72	-	1	0	100%	1
5LDS_NAG_C_1003	100%	65%	0.016	0.997	0.54	0.62	-	-	3	100%	1
7DDF_NAG_B_401	100%	84%	0.016	0.996	0.21	0.49	-	-	0	100%	1
2HQM_NAG_A_1301	100%	61%	0.018	0.996	0.59	0.7	-	-	0	100%	1
3THD_NAG_B_702	100%	48%	0.019	0.995	0.71	1.18	-	-	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6WYD | pdb_00006wyd

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose