1HRN | pdb_00001hrn

HIGH RESOLUTION CRYSTAL STRUCTURES OF RECOMBINANT HUMAN RENIN IN COMPLEX WITH POLYHYDROXYMONOAMIDE INHIBITORS

• PDB DOI: https://doi.org/10.2210/pdb1HRN/pdb

• Classification: HYDROLASE/HYDROLASE INHIBITOR
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 1995-03-31 Released: 1995-06-03 
• Deposition Author(s): Tong, L., Anderson, P.C.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Work: 
  0.215 (Depositor) 
• R-Value Observed: 
  0.215 (Depositor) 

Literature

High resolution crystal structures of recombinant human renin in complex with polyhydroxymonoamide inhibitors.

Tong, L., Pav, S., Lamarre, D., Pilote, L., LaPlante, S., Anderson, P.C., Jung, G.

(1995) J Mol Biology 250: 211-222

• PubMed: 7608971 
• DOI: https://doi.org/10.1006/jmbi.1995.0372
• Primary Citation Related Structures: 
  1HRN


• PubMed Abstract: 
  

  The crystal structures of recombinant glycosylated human renin in complex with several polyhydroxymonoamide inhibitors have been determined at up to 1.8 A resolution. The high resolution structures permit a detailed analysis of the conformation of renin, the interactions between the inhibitors and renin, and the network of ordered water molecules. The polyhydroxymonoamide inhibitors are bound with their backbones in an extended conformation, and with their side-chains occupying the S3 to S1 pockets. The inhibited renin molecules are shown to exist in both the closed and the open conformations. Inhibitors bound to the two distinct forms of renin can assume different conformations at the P3 position.

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Organizational Affiliation: 
• Department of Inflammatory Diseases, Boehringer Ingelheim Pharmaceuticals Inc., Ridgefield, CT 06877, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 75.33 kDa 
• Atom Count: 5,593 
• Modeled Residue Count: 669 
• Deposited Residue Count: 674 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RENIN	A, B	337	Homo sapiens	Mutation(s): 0  EC: 3.4.23.15
UniProt & NIH Common Fund Data Resources
Find proteins for P00797 (Homo sapiens) Explore P00797  Go to UniProtKB:  P00797
PHAROS:  P00797 GTEx:  ENSG00000143839
Glycosylation
Glycosylation Sites: 1		Go to GlyGen: P00797-1

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
03D	D [auth A], E [auth B]	(2R,4S,5S)-N-[(2S,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methylheptan-2-yl]-2-(cyclopropylmethyl)-4,5-dihydroxy-6-phenylhexanamide C30 H49 N O5 LRMIUNSMKAGCAH-ZGLCPUQGSA-N
NAG	C [auth A], F [auth B]	2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Work:  0.215 (Depositor) 
• R-Value Observed: 0.215 (Depositor) 

Space Group: P 2₁ 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 141.1	α = 90
b = 141.1	β = 90
c = 141.1	γ = 90

Software Package:

Software Name	Purpose
X-PLOR	model building
TNT	refinement
X-PLOR	refinement
X-PLOR	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 1995-06-03 
Deposition Author(s): Tong, L., Anderson, P.C.

Revision History  

• Version 1.0: 1995-06-03
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Non-polymer description, Version format compliance
• Version 1.3: 2011-08-24
  Changes: Non-polymer description
• Version 1.4: 2019-07-17
  Changes: Data collection, Derived calculations, Other, Refinement description
• Version 1.5: 2019-08-14
  Changes: Data collection, Refinement description
• Version 1.6: 2020-07-29
  Type: Remediation
  Reason: Carbohydrate remediation
  Changes: Advisory, Data collection, Derived calculations, Structure summary
• Version 1.7: 2024-10-23
  Changes: Data collection, Database references, Structure summary