2X64

GLUTATHIONE-S-TRANSFERASE FROM XYLELLA FASTIDIOSA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 
    0.219 (Depositor) 
  • R-Value Work: 
    0.167 (Depositor) 
  • R-Value Observed: 
    0.169 (Depositor) 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted GSHClick on this verticalbar to view details

This is version 1.2 of the entry. See complete history


Literature

Structural and Biophysical Characterization of the Recombinant Glutathione-S-Transferase from Xylella

Rodrigues, N.C.Muniz, J.R.C.Bleicher, L.Garcia, W.Travensolo, R.F.Ulian-De-Araujo, A.P.Carrilho, E.Garratt, R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GLUTATHIONE-S-TRANSFERASE
A, B, C, D, E
207Xylella fastidiosa 9a5cMutation(s): 0 
UniProt
Find proteins for Q9PE18 (Xylella fastidiosa (strain 9a5c))
Explore Q9PE18 
Go to UniProtKB:  Q9PE18
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9PE18
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GSH
Query on GSH

Download Ideal Coordinates CCD File 
H [auth A]
I [auth B]
K [auth C]
N [auth D]
P [auth E]
GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
CL
Query on CL

Download Ideal Coordinates CCD File 
G [auth A]
J [auth B]
L [auth C]
M [auth D]
O [auth E]
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free:  0.219 (Depositor) 
  • R-Value Work:  0.167 (Depositor) 
  • R-Value Observed: 0.169 (Depositor) 
Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.67α = 116.53
b = 87.89β = 99.33
c = 90.78γ = 94.49
Software Package:
Software NamePurpose
BUSTERrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted GSHClick on this verticalbar to view details

Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-03-02
    Type: Initial release
  • Version 1.1: 2011-12-07
    Changes: Advisory, Atomic model, Derived calculations, Non-polymer description, Refinement description, Version format compliance
  • Version 1.2: 2024-05-08
    Changes: Data collection, Database references, Derived calculations, Other