Serine bacteriolytic protease L1 of Lysobacter sp. XL1 complexed with protease inhibitor AEBSF: features of interaction
Kudryakova, I., Gabdulkhakov, A., Tishchenko, S., Afoshin, A., Vasilyeva, N.(2019) Process Biochem 
Experimental Data Snapshot
Starting Model: experimental
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(2019) Process Biochem 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Lytic endopeptidase preproenzyme | 199 | Lysobacter sp. XL1 | Mutation(s): 0  Gene Names: alpA | ![]() | |
UniProt | |||||
Find proteins for D2K8B3 (Lysobacter sp. (strain XL1)) Explore D2K8B3  Go to UniProtKB:  D2K8B3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D2K8B3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AES Query on AES | BA [auth D], H [auth A], M [auth B], U [auth C] | 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE C8 H10 F N O2 S MGSKVZWGBWPBTF-UHFFFAOYSA-N | |||
JAT Query on JAT | CA [auth D], N [auth B], V [auth C] | 4-(2-azanylethyl)benzenesulfonic acid C8 H11 N O3 S RYBFWJVHZIKGQJ-UHFFFAOYSA-N | |||
PGE Query on PGE | K [auth A] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
PEG Query on PEG | Q [auth B], R [auth B], Y [auth C] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
SO4 Query on SO4 | AA [auth D] E [auth A] F [auth A] G [auth A] L [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | DA [auth D], I [auth A], J [auth A], P [auth B], X [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CL Query on CL | O [auth B], W [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 41.855 | α = 90 |
b = 122.553 | β = 98.64 |
c = 78.988 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |