Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes
Kato, K., Nagao, R., Ueno, Y., Yokono, M., Suzuki, T., Jiang, T.Y., Dohmae, N., Akita, F., Akimoto, S., Miyazaki, N., Shen, J.R.(2022) Biorxiv
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Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
(2022) Biorxiv
Biological assembly 1 assigned by authors.
Macromolecule Content
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I P700 chlorophyll a apoprotein A1 | A [auth aA], GA [auth dA], L [auth bA], V [auth cA] | 752 | Cyanophora paradoxa | Mutation(s): 0 EC: 1.97.1.12 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for A0A097PBL3 (Cyanophora paradoxa) Explore A0A097PBL3 Go to UniProtKB: A0A097PBL3 | |||||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A097PBL3 | ||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I P700 chlorophyll a apoprotein A2 | B [auth aB], HA [auth dB], M [auth bB], W [auth cB] | 737 | Cyanophora paradoxa | Mutation(s): 0 EC: 1.97.1.12 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48113 (Cyanophora paradoxa) Explore P48113 Go to UniProtKB: P48113 | |||||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48113 | ||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I iron-sulfur center | C [auth aC], IA [auth dC], N [auth bC], X [auth cC] | 81 | Cyanophora paradoxa | Mutation(s): 0 EC: 1.97.1.12 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P31173 (Cyanophora paradoxa) Explore P31173 Go to UniProtKB: P31173 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P31173 | ||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit II, cyanelle | D [auth aD], JA [auth dD], O [auth bD], Y [auth cD] | 220 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for Q9T4W8 (Cyanophora paradoxa) Explore Q9T4W8 Go to UniProtKB: Q9T4W8 | |||||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9T4W8 | ||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit IV | E [auth aE], KA [auth dE], P [auth bE], Z [auth cE] | 70 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48114 (Cyanophora paradoxa) Explore P48114 Go to UniProtKB: P48114 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48114 | ||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit III | AA [auth cF], F [auth aF], LA [auth dF], Q [auth bF] | 186 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48115 (Cyanophora paradoxa) Explore P48115 Go to UniProtKB: P48115 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48115 | ||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit VIII | BA [auth cI], G [auth aI], MA [auth dI], R [auth bI] | 35 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48116 (Cyanophora paradoxa) Explore P48116 Go to UniProtKB: P48116 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48116 | ||||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit IX | CA [auth cJ], H [auth aJ], NA [auth dJ], S [auth bJ] | 40 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48117 (Cyanophora paradoxa) Explore P48117 Go to UniProtKB: P48117 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48117 | ||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit PsaK 1 | DA [auth cK], I [auth aK] | 157 | Cyanophora paradoxa | Mutation(s): 0 | ![]() |
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 10 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit XI | EA [auth cL], J [auth aL], OA [auth dL], T [auth bL] | 146 | Cyanophora paradoxa | Mutation(s): 0 | ![]() |
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 11 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem I reaction center subunit XII | FA [auth cM], K [auth aM], PA [auth dM], U [auth bM] | 31 | Cyanophora paradoxa | Mutation(s): 0 Membrane Entity: Yes | ![]() |
UniProt | |||||
Find proteins for P48185 (Cyanophora paradoxa) Explore P48185 Go to UniProtKB: P48185 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P48185 | ||||
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Task | Software Package | Version |
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MODEL REFINEMENT | PHENIX | 1.13_2998 |
RECONSTRUCTION | RELION | 3 |
RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.
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