Structural basis for pegRNA-guided reverse transcription by a prime editor
Shuto, Y., Nakagawa, R., Zhu, S., Hoki, M., Omura, S.N., Hirano, H., Itoh, Y., Zhang, F., Nureki, O.(2024) Nature 631: 224-231
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2024) Nature 631: 224-231
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
CRISPR-associated endonuclease Cas9/Csn1 | C [auth A] | 1,367 | Streptococcus pyogenes serotype M1 | Mutation(s): 2  Gene Names: cas9 | ![]() |
UniProt | |||||
Find proteins for Q99ZW2 (Streptococcus pyogenes serotype M1) Explore Q99ZW2  Go to UniProtKB:  Q99ZW2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99ZW2 | ||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Gag-Pol polyprotein | F [auth E] | 496 | Moloney murine leukemia virus | Mutation(s): 6  Gene Names: gag-pro-pol | ![]() |
UniProt | |||||
Find proteins for Q8UN00 (Moloney murine leukemia virus) Explore Q8UN00  Go to UniProtKB:  Q8UN00 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8UN00 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (51-MER) | A [auth C] | 51 | Streptococcus pyogenes | ![]() | |
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*TP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*TP*AP*CP*TP*AP*G)-3') | B [auth D] | 17 | Streptococcus pyogenes | ![]() | |
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Length | Organism | Image | |
RNA (137-MER) | D [auth B] | 137 | Streptococcus pyogenes | ![]() | |
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Entity ID: 5 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (50-MER) | E [auth F] | 50 | Streptococcus pyogenes | ![]() | |
Sequence AnnotationsExpand | |||||
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Funding Organization | Location | Grant Number |
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Japan Agency for Medical Research and Development (AMED) | Japan | JP23ama121012 |