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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Avvaru, B.S."

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Search Summary

This query matches 51 Structures.

Refinements

Structure Determination Methodology

experimental (51)

Scientific Name of Source Organism

Homo sapiens (51)

Taxonomy

Eukaryota (51)

Experimental Method

X-RAY DIFFRACTION (51)

Polymer Entity Type

Protein (51)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (19)
	1.5 - 2.0 (30)

Release Date

	2005 - 2009 (17)
	2010 - 2014 (22)
	2015 - 2019 (12)

Enzyme Classification Name

Lyases (51)

Symmetry Type

Asymmetric (51)

SCOP Classification

All beta proteins (51)

AllSelected

1 to 25 of 51 Structures

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Explore in 3D

3D8W \| pdb_00003d8w	Download File View File

Use of a carbonic Anhydrase II, IX Active-site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase II (protein)
Unique Ligands	D8W, ZN

Explore in 3D

3D92 \| pdb_00003d92	Download File View File

Human carbonic anhydrase II bound with substrate carbon dioxide

Domsic, J.F., Avvaru, B.S., McKenna, R.

(2008) J Biological Chem 283: 30766-30771

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	carbonic anhydrase II (protein)
Unique Ligands	CO2, GOL, ZN

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3D93 \| pdb_00003d93	Download File View File

Apo Human carbonic anhydrase II bound with substrate carbon dioxide

Domsic, J.F., Avvaru, B.S., McKenna, R.

(2008) J Biological Chem 283: 30766-30771

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	carbonic anhydrase II (protein)
Unique Ligands	CO2, GOL

Explore in 3D

3D9Z \| pdb_00003d9z	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	D9Z, ZN

Explore in 3D

3DAZ \| pdb_00003daz	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	MZM, ZN

Explore in 3D

3DBU \| pdb_00003dbu	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	D8W, ZN

Explore in 3D

3DC3 \| pdb_00003dc3	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	AZM, ZN

Explore in 3D

3DC9 \| pdb_00003dc9	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3DCC \| pdb_00003dcc	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	D9Z, ZN

Explore in 3D

3DCS \| pdb_00003dcs	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	MZM, ZN

Explore in 3D

3DCW \| pdb_00003dcw	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	EZL, ZN

Explore in 3D

3DD0 \| pdb_00003dd0	Download File View File

Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.

(2009) Biochemistry 48: 1322-1331

Released	2009-03-03
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	EZL, ZN

Explore in 3D

3DV7 \| pdb_00003dv7	Download File View File

Role of Hydrophilic Residues in Proton Transfer During Catalysis by Human Carbonic Anhydrase II (N62A)

Avvaru, B.S.

(2008) Biochemistry 47: 12028-12036

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3DVB \| pdb_00003dvb	Download File View File

X-ray crystal structure of mutant N62V human Carbonic Anhydrase II

Avvaru, B.S.

(2008) Biochemistry 47: 12028-12036

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3DVC \| pdb_00003dvc	Download File View File

X-ray crystal structure of mutant N62T of human Carbonic Anhydrase II

Avvaru, B.S.

(2008) Biochemistry 47: 12028-12036

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3DVD \| pdb_00003dvd	Download File View File

X-ray crystal structure of mutant N62D of human Carbonic Anhydrase II

Avvaru, B.S.

(2008) Biochemistry 47: 12028-12036

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3GZ0 \| pdb_00003gz0	Download File View File

Apo-human carbonic anhydrase II revisited: Implications of the loss of a metal in protein structure, stability and solvent network

Avvaru, B.S., McKenna, R.

(2009) Biochemistry 48: 7365-7372

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ZN

Explore in 3D

3KOI \| pdb_00003koi	Download File View File

Crystal structure of cobalt (III) human carbonic anhydrase II at pH 6.0

Avvaru, B.S.

(2010) Arch Biochem Biophys 502: 53-59

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	3CO

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3KOK \| pdb_00003kok	Download File View File

Crystal structure of cobalt (II) human carbonic anhydrase II at pH 8.5

Avvaru, B.S.

(2010) Arch Biochem Biophys 502: 53-59

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	CO

Explore in 3D

3KON \| pdb_00003kon	Download File View File

Crystal structure of cobalt (II) human carbonic anhydrase II at pH 11.0

Avvaru, B.S.

(2010) Arch Biochem Biophys 502: 53-59

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	CO

Explore in 3D

3KS3 \| pdb_00003ks3	Download File View File

High resolution structure of Human Carbonic Anhydrase II at 0.9 A

Avvaru, B.S.

(2010) Biochemistry 49: 249-251

Released	2010-01-26
Method	X-RAY DIFFRACTION 0.9 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	GOL, ZN

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3MHC \| pdb_00003mhc	Download File View File

Crystal structure of human cabonic anhydrase II in adduct with an adamantyl analogue of acetazolamide in a novel hydrophobic binding pocket

Avvaru, B.S.

(2010) Bioorg Med Chem Lett 20: 4376-4381

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.698 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	ARZ, ZN

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3ML2 \| pdb_00003ml2	Download File View File

Human carbonic anhydsase II in complex with an aryl sulfonamide inhibitor

Avvaru, B.S., Wagner, J., Robbins, A.H., Mckenna, R.

(2010) Bioorg Med Chem 18: 4873-4878

Released	2011-04-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	GOL, SU0, ZN

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3MMF \| pdb_00003mmf	Download File View File

Crystal structure of human carbonic anhydrase II in complex with a 1,3,5-triazine-substituted benzenesulfonamide inhibitor

Avvaru, B.S., Wagner, J., Robbins, A.H., Mckenna, R.

(2011) Bioorg Med Chem 19: 3105-3119

Released	2011-04-20
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	D9H, GOL, ZN

Explore in 3D

3MNA \| pdb_00003mna	Download File View File

The crystal structure of human carbonic anhydrase Ii in complex with a 1,3,5-triazine-substituted benzenesulfonamide inhibitor

Avvaru, B.S., Wagner, J., Robbins, A.H., Mckenna, R.

(2011) Bioorg Med Chem 19: 3105-3119

Released	2011-04-20
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	DWH, GOL, ZN

1 to 25 of 51 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3D8W | pdb_00003d8w

3D92 | pdb_00003d92

3D93 | pdb_00003d93

3D9Z | pdb_00003d9z

3DAZ | pdb_00003daz

3DBU | pdb_00003dbu

3DC3 | pdb_00003dc3

3DC9 | pdb_00003dc9

3DCC | pdb_00003dcc

3DCS | pdb_00003dcs

3DCW | pdb_00003dcw

3DD0 | pdb_00003dd0

3DV7 | pdb_00003dv7

3DVB | pdb_00003dvb

3DVC | pdb_00003dvc

3DVD | pdb_00003dvd

3GZ0 | pdb_00003gz0

3KOI | pdb_00003koi

3KOK | pdb_00003kok

3KON | pdb_00003kon

3KS3 | pdb_00003ks3

3MHC | pdb_00003mhc

3ML2 | pdb_00003ml2

3MMF | pdb_00003mmf

3MNA | pdb_00003mna