RCSB PDB Help
Additional Resources
Electron Microscopy Software
Access additional resources of interest, submitted by community members.
| CTFFIND | Software for estimating contrast transfer function (CTF) |
| EMAN/EMAN2 | Software for cryo-EM image processing and high-resolution 3D volume reconstruction |
| EPU | Software for image collection |
| FREALIGN | Software for high-resolution refinement of 3D reconstructions from cryo-EM images of single particles |
| Gctf | Software for real-time CTF correction |
| ISOLDE | Software for building models into moderate-to-low resolution experimental maps |
| Leginon | System for automated collection of transmission electron microscope images |
| PHENIX | Software for model refinement |
| REFMAC | Software for model refinement |
| RELION | Software for cryo-EM image processing and high-resolution 3D volume reconstruction |
| SerialEM | Software for image collection |
| SPIDER | Software for 3D volume reconstruction |
| UCSF Chimera/ChimeraX | Software for macromolecule model building, fitting, and visualization |
| cisTEM | Software for cryo-EM image processing and high-resolution 3D volume reconstruction |
| Coot | Software for macromolecule model building and fitting |
| cryoSPARC | Software for cryo-EM image processing and high-resolution 3D volume reconstruction |
| MDFF for cryo-EM | Software for flexible fitting of atomic structures into density maps |
Please report any encountered broken links to info@rcsb.org
Last updated: 2/23/2023
